RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 POSTNQ15063 836 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 PKN2Q16513 984 aaKnown RBP17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 XKR3Q5GH77 459 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 GJC2Q5T442 439 aaPredicted RBP17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 SH3RF1Q7Z6J0 888 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 CKAP2LQ8IYA6 745 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 PAGE5Q96GU1 130 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 HMX1Q9NP08 348 aaPredicted RBP17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 NRBP2Q9NSY0 501 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 KCND2Q9NZV8 630 aa17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 ZNF215Q9UL58 517 aaPredicted RBP17.67■□□□□ 0.42
TRAFD1-203ENST00000547063 E9PMD0 336 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 GTPBP6O43824 516 aaPredicted RBP17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 ZEB2O60315 1214 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 KPNA6O60684 536 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 SMC2O95347 1197 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 MMP3P08254 477 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 YWHABP31946 246 aaKnown RBP17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 PRKCEQ02156 737 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 TRIM32Q13049 653 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 CAMK4Q16566 473 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 TMEM63BQ5T3F8 832 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 KCNK18Q7Z418 384 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 SYT2Q8N9I0 419 aaPredicted RBP17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 UPF3AQ9H1J1 476 aaKnown RBP17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 BHMT2Q9H2M3 363 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 ERAP1Q9NZ08 941 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 PPME1Q9Y570 386 aa17.66■□□□□ 0.42
TRAFD1-203ENST00000547063 ARHGEF35A5YM69 484 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 ADCY6O43306 1168 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 OATP04181 439 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 SSBP05455 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 AFMP43652 599 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 GJA9P57773 515 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 PSMC6P62333 389 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 NKX3-2P78367 333 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 MCM6Q14566 821 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 UGCGQ16739 394 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 SLC9C1Q4G0N8 1177 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 UTP14CQ5TAP6 766 aaKnown RBP17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 EXOC8Q8IYI6 725 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 PIGOQ8TEQ8 1089 aa17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 BBXQ8WY36 941 aaPredicted RBP17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 CCDC47Q96A33 483 aaKnown RBP17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 WRAP73Q9P2S5 460 aaPredicted RBP17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 DDX20Q9UHI6 824 aaKnown RBP17.65■□□□□ 0.42
TRAFD1-203ENST00000547063 ZNF862O60290 1169 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 LGALS2P05162 132 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 CCND3P30281 292 aaPredicted RBP17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 LBX1P52954 281 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 MDM2Q00987 491 aaPredicted RBP17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 FSCN1Q16658 493 aaKnown RBP17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 CNNM4Q6P4Q7 775 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 RBM43Q6ZSC3 357 aaKnown RBP17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 PCYT2Q99447 389 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 C7orf25Q9BPX7 421 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 TIPINQ9BVW5 301 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 GTPBP4Q9BZE4 634 aaKnown RBP17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 XPNPEP3Q9NQH7 507 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 KIAA1468Q9P260 1216 aa17.64■□□□□ 0.41
TRAFD1-203ENST00000547063 KRT18P05783 430 aaKnown RBP17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 RARRES1P49788 294 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 SLC12A3P55017 1021 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 DHX8Q14562 1220 aaKnown RBP17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 XKR9Q5GH70 373 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 FBXO46Q6PJ61 603 aaPredicted RBP17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 GPBP1Q86WP2 473 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 ATP8B4Q8TF62 1192 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 SMARCE1Q969G3 411 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 GSDMAQ96QA5 445 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 KATNAL1Q9BW62 490 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 NIFKQ9BYG3 293 aaKnown RBP17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 TRIM9Q9C026 710 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 RMND1Q9NWS8 449 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 SEPT9Q9UHD8 586 aaPredicted RBP17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 TELO2Q9Y4R8 837 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 SYNRGQ9UMZ2 1314 aa17.63■□□□□ 0.41
TRAFD1-203ENST00000547063 H3BRB1 525 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 HBP1O60381 514 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 CST5P28325 142 aaPredicted RBP17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 DPYDQ12882 1025 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 PNOCQ13519 176 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 ZSCAN23Q3MJ62 389 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 GNASQ5JWF2 1037 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 ANO5Q75V66 913 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 PCSK9Q8NBP7 692 aaKnown RBP17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 LRRC15Q8TF66 581 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 CEP170P1Q96L14 293 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 C16orf70Q9BSU1 422 aa17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 TUT1Q9H6E5 874 aaKnown RBP17.62■□□□□ 0.41
TRAFD1-203ENST00000547063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 PVALEFA0A1B0GWK0 134 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 DGAT1O75907 488 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 CYP11B2P19099 503 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 ASIC1P78348 528 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 NT5DC1Q5TFE4 455 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 RINT1Q6NUQ1 792 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 PADI6Q6TGC4 694 aa17.61■□□□□ 0.41
TRAFD1-203ENST00000547063 SASS6Q6UVJ0 657 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms