RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 GPR142Q7Z601 462 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 CCDC83Q8IWF9 413 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 ZNF713Q8N859 430 aaPredicted RBP7.29□□□□□ -1.24
PRKDC-211ENST00000546304 NSUN7Q8NE18 718 aaKnown RBP7.29□□□□□ -1.24
PRKDC-211ENST00000546304 CHST13Q8NET6 341 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 ELOA3Q8NG57 546 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 SOCS4Q8WXH5 440 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 TNFRSF25Q93038 417 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 COL26A1Q96A83 441 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 TMX3Q96JJ7 454 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 KLK14Q9P0G3 267 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 FBXO40Q9UH90 709 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 RIPK3Q9Y572 518 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 KIAA1217Q5T5P2 1943 aa7.29□□□□□ -1.24
PRKDC-211ENST00000546304 PFASO15067 1338 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 KIAA0100Q14667 2235 aaKnown RBP7.28□□□□□ -1.24
PRKDC-211ENST00000546304 K7ELQ4 463 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-211ENST00000546304 JAK2O60674 1132 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 DEXIO95424 95 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 CTDNEP1O95476 244 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 SCG2P13521 617 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 PRKCZQ05513 592 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 TRAF1Q13077 416 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 KCTD2Q14681 263 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 PFKFB3Q16875 520 aaPredicted RBP7.28□□□□□ -1.24
PRKDC-211ENST00000546304 C11orf91Q3C1V1 193 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 MUM1L1Q5H9M0 696 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 SLC30A10Q6XR72 485 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 PLEKHH3Q7Z736 793 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 ALYREFQ86V81 257 aaKnown RBP7.28□□□□□ -1.24
PRKDC-211ENST00000546304 HSCBQ8IWL3 235 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 ABRAQ8N0Z2 381 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 KCTD17Q8N5Z5 321 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 CLEC4DQ8WXI8 215 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 COA7Q96BR5 231 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 MMP19Q99542 508 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 APBA2Q99767 749 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 A1CFQ9NQ94 594 aaKnown RBP7.28□□□□□ -1.24
PRKDC-211ENST00000546304 PCDHA1Q9Y5I3 950 aa7.28□□□□□ -1.24
PRKDC-211ENST00000546304 MYH15Q9Y2K3 1946 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 SLC15A5A6NIM6 579 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 STXBP3O00186 592 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 GNB5O14775 395 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 OPLAHO14841 1288 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 PRPF3O43395 683 aaKnown RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 PRMT3O60678 531 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 FCER1AP12319 257 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 ADORA2AP29274 412 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 NAPAP54920 295 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 HMGN5P82970 282 aaKnown RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 SSRP1Q08945 709 aaKnown RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 ARHGEF6Q15052 776 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 PKN1Q16512 942 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 NSMFQ6X4W1 530 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 OTOP1Q7RTM1 612 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 CTU1Q7Z7A3 348 aaKnown RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 ANKRD35Q8N283 1001 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 CCDC148Q8NFR7 591 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 CLP1Q92989 425 aaKnown RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 SNX21Q969T3 373 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 LLPHQ9BRT6 129 aaKnown RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 C11orf16Q9NQ32 467 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 BARHL2Q9NY43 387 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 CXXC1Q9P0U4 656 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 ORC3Q9UBD5 711 aaPredicted RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 SRRDQ9UH36 339 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 MRPL11Q9Y3B7 192 aaKnown RBP7.27□□□□□ -1.25
PRKDC-211ENST00000546304 TRIM17Q9Y577 477 aa7.27□□□□□ -1.25
PRKDC-211ENST00000546304 MKI67P46013 3256 aaKnown RBP7.26□□□□□ -1.25
PRKDC-211ENST00000546304 ESYT2A0FGR8 921 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 STRNO43815 780 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 DTNBO60941 627 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 EPB42P16452 691 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 ALAS2P22557 587 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 RGS2P41220 211 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 FLT3LGP49771 235 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 IDH3AP50213 366 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 HSD17B4P51659 736 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 ADCY7P51828 1080 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 RPS6P62753 249 aaKnown RBP7.26□□□□□ -1.25
PRKDC-211ENST00000546304 GHRHRQ02643 423 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 CUL4AQ13619 759 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 RNF207Q6ZRF8 634 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 MCF2L2Q86YR7 1114 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 SMARCC2Q8TAQ2 1214 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 CCDC12Q8WUD4 166 aaPredicted RBP7.26□□□□□ -1.25
PRKDC-211ENST00000546304 WASF1Q92558 559 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 CUL5Q93034 780 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 SHISA4Q96DD7 197 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 DDX11Q96FC9 970 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 AIFM3Q96NN9 605 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 GSX2Q9BZM3 304 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 PRDM10Q9NQV6 1147 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 CYP39A1Q9NYL5 469 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 VPS54Q9P1Q0 977 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 LRFN2Q9ULH4 789 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 DNAH12Q6ZR08 3092 aa7.26□□□□□ -1.25
PRKDC-211ENST00000546304 DNAJC25-GNG10A0A024R161 153 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms