RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ECM1Q16610 540 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 GRIPAP1Q4V328 841 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 H2AFVQ71UI9 128 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 IFT20Q8IY31 132 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 FAM186BQ8IYM0 893 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 ARL8AQ96BM9 186 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 ZNF577Q9BSK1 485 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 CELF4Q9BZC1 486 aaKnown RBP10.68□□□□□ -0.7
TRAF1-203ENST00000546084 ZMYND12Q9H0C1 365 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 NT5C3AQ9H0P0 336 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 STIM2Q9P246 746 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 AMACRQ9UHK6 382 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 CCPG1Q9ULG6 757 aa10.68□□□□□ -0.7
TRAF1-203ENST00000546084 MED24O75448 989 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 TCP1P17987 556 aaKnown RBP10.67□□□□□ -0.7
TRAF1-203ENST00000546084 TNNC1P63316 161 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 GUCY1A3Q02108 690 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 PPP1R7Q15435 360 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 ZNF394Q53GI3 561 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 XKR9Q5GH70 373 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 ANKRD42Q8N9B4 389 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 SAAL1Q96ER3 474 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 AK8Q96MA6 479 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 KIFC3Q9BVG8 833 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 UBE2TQ9NPD8 197 aaPredicted RBP10.67□□□□□ -0.7
TRAF1-203ENST00000546084 ACP6Q9NPH0 428 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 GGT7Q9UJ14 662 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 ANO9A1A5B4 782 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 TISP43B9A030 160 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 GOLGA8KD6RF30 607 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 NDUFB10O96000 172 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 VIMP08670 466 aaKnown RBP10.67□□□□□ -0.7
TRAF1-203ENST00000546084 GYS1P13807 737 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 EPHB4P54760 987 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 COG2Q14746 738 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 GSTA5Q7RTV2 222 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 MIER3Q7Z3K6 550 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 CCDC105Q8IYK2 499 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 MTMR8Q96EF0 704 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 CALR3Q96L12 384 aaKnown RBP10.67□□□□□ -0.7
TRAF1-203ENST00000546084 REEP2Q9BRK0 252 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 CCSER1Q9C0I3 900 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 ATP6V0A2Q9Y487 856 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 MYH15Q9Y2K3 1946 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 MYH2Q9UKX2 1941 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 AARSP49588 968 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRAF1-203ENST00000546084 CASP5P51878 434 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 OSTNP61366 133 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 KAZNQ674X7 775 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 GBP6Q6ZN66 633 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 MMS22LQ6ZRQ5 1243 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 LRRC15Q8TF66 581 aa10.67□□□□□ -0.7
TRAF1-203ENST00000546084 RBAK-RBAKDNI3L0D1 243 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 CALUO43852 315 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SMAD1Q15797 465 aaKnown RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 GPATCH4Q5T3I0 446 aaKnown RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 MTA3Q9BTC8 594 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 PI4KBQ9UBF8 816 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 TBK1Q9UHD2 729 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 PDS5AQ29RF7 1337 aaKnown RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 ECE2O60344 883 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 RPS6KA5O75582 802 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 FGGP02679 453 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 CTNNA2P26232 953 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SEC24CP53992 1094 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SOX10P56693 466 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 BIRC2Q13490 618 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SBK1Q52WX2 424 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 FAM182AQ5T1J6 154 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SYDE2Q5VT97 1194 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 PASD1Q8IV76 773 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 CERS5Q8N5B7 392 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 GJD4Q96KN9 370 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 RAVER2Q9HCJ3 691 aaKnown RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 PLCB1Q9NQ66 1216 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 MARF1Q9Y4F3 1742 aaKnown RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 GCOM1H8Y6P7 765 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 AGPSO00116 658 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 POLR2MP0CAP2 368 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 TNNI1P19237 187 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 PEX3P56589 373 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 MAP2K1Q02750 393 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 IFT88Q13099 833 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 CCDC38Q502W7 563 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 GALNT17Q6IS24 598 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 B4GALNT4Q76KP1 1039 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 PNMA5Q96PV4 448 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 LBHD1Q9BQE6 289 aaPredicted RBP10.66□□□□□ -0.7
TRAF1-203ENST00000546084 TMEM39BQ9GZU3 492 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 ANKFY1Q9P2R3 1169 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 ASIC3Q9UHC3 531 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 SNX24Q9Y343 169 aa10.66□□□□□ -0.7
TRAF1-203ENST00000546084 CEP83Q9Y592 693 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms