RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 CHMP4BP1P59074 171 aa20.76■□□□□ 0.91
CCDC189-212ENST00000546006 ECM1Q16610 540 aa20.76■□□□□ 0.91
CCDC189-212ENST00000546006 POTEBQ6S5H4 581 aa20.76■□□□□ 0.91
CCDC189-212ENST00000546006 SHC4Q6S5L8 630 aa20.76■□□□□ 0.91
CCDC189-212ENST00000546006 ATP8B4Q8TF62 1192 aa20.76■□□□□ 0.91
CCDC189-212ENST00000546006 FAM167AQ96KS9 214 aa20.76■□□□□ 0.91
CCDC189-212ENST00000546006 SENP6Q9GZR1 1112 aaPredicted RBP20.76■□□□□ 0.91
CCDC189-212ENST00000546006 KDM3AQ9Y4C1 1321 aa20.76■□□□□ 0.91
CCDC189-212ENST00000546006 WDR81Q562E7 1941 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 MYH9P35579 1960 aaKnown RBP20.75■□□□□ 0.91
CCDC189-212ENST00000546006 STBD1O95210 358 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 TXLNAP40222 546 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 NBPF20Q3BBV1 942 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 XKR3Q5GH77 459 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 HYIQ5T013 277 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 POTEGQ6S5H5 508 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 TMEM87AQ8NBN3 555 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 BBXQ8WY36 941 aaPredicted RBP20.75■□□□□ 0.91
CCDC189-212ENST00000546006 PAWRQ96IZ0 340 aaKnown RBP20.75■□□□□ 0.91
CCDC189-212ENST00000546006 GBP4Q96PP9 640 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 C11orf49Q9H6J7 331 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 GRIN2DO15399 1336 aa20.75■□□□□ 0.91
CCDC189-212ENST00000546006 A0A0U1RQG5 324 aaPredicted RBP20.74■□□□□ 0.91
CCDC189-212ENST00000546006 ITGA7Q13683 1181 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 ZRSR1Q15695 479 aaKnown RBP20.74■□□□□ 0.91
CCDC189-212ENST00000546006 RESP18Q5W5W9 173 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 NECAB2Q7Z6G3 386 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 CALML4Q96GE6 196 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 PNMA5Q96PV4 448 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 NRBP2Q9NSY0 501 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 KIAA1024Q9UPX6 916 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 TRPC6Q9Y210 931 aa20.74■□□□□ 0.91
CCDC189-212ENST00000546006 A0A1W2PQ27 194 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 A0A1W2PQ64 194 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 A0A1W2PQD8 194 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 HBP1O60381 514 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 CMA1P23946 247 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 YWHABP31946 246 aaKnown RBP20.73■□□□□ 0.91
CCDC189-212ENST00000546006 SOX10P56693 466 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 GRB10Q13322 594 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 KARSQ15046 597 aaKnown RBP20.73■□□□□ 0.91
CCDC189-212ENST00000546006 NFRKBQ6P4R8 1299 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 TRMT1LQ7Z2T5 733 aaKnown RBP20.73■□□□□ 0.91
CCDC189-212ENST00000546006 UBE2Q1Q7Z7E8 422 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 C7orf31Q8N865 590 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 CDK5RAP3Q96JB5 506 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 NACC1Q96RE7 527 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 NT5C3AQ9H0P0 336 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 DDX19AQ9NUU7 478 aaKnown RBP20.73■□□□□ 0.91
CCDC189-212ENST00000546006 DDX11L8A8MPP1 907 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 SMIM10L2AP0DMW4 78 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 SMIM10L2BP0DMW5 78 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 TMEM119Q4V9L6 283 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 ANO5Q75V66 913 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 SESTD1Q86VW0 696 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 KCTD17Q8N5Z5 321 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 SLC43A3Q8NBI5 491 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 RASSF8Q8NHQ8 419 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 PPP1R13LQ8WUF5 828 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 SEZ6LQ9BYH1 1024 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 FAM13BQ9NYF5 915 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 CCDC39Q9UFE4 941 aa20.73■□□□□ 0.91
CCDC189-212ENST00000546006 SEPT9Q9UHD8 586 aaPredicted RBP20.73■□□□□ 0.91
CCDC189-212ENST00000546006 GOLGA6L4A6NEF3 574 aa20.72■□□□□ 0.91
CCDC189-212ENST00000546006 ARVCFO00192 962 aa20.72■□□□□ 0.91
CCDC189-212ENST00000546006 XRCC6P12956 609 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC189-212ENST00000546006 PPFIA1Q13136 1202 aa20.72■□□□□ 0.91
CCDC189-212ENST00000546006 OTUD6AQ7L8S5 288 aa20.72■□□□□ 0.91
CCDC189-212ENST00000546006 PLIN2Q99541 437 aa20.72■□□□□ 0.91
CCDC189-212ENST00000546006 NIFKQ9BYG3 293 aaKnown RBP20.72■□□□□ 0.91
CCDC189-212ENST00000546006 HDAC6Q9UBN7 1215 aa20.72■□□□□ 0.91
CCDC189-212ENST00000546006 A0A087WWV3 80 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 TMEM150BA6NC51 233 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 ZBTB39O15060 712 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 INSRRP14616 1297 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 PLCG1P19174 1290 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 PTPN11Q06124 597 aaPredicted RBP20.71■□□□□ 0.91
CCDC189-212ENST00000546006 FAM47CQ5HY64 1035 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 ZNF484Q5JVG2 852 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 SLC39A5Q6ZMH5 540 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 PIGOQ8TEQ8 1089 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 ANKEF1Q9NU02 776 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 GTF2IRD1Q9UHL9 959 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 DNM3Q9UQ16 869 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 NRCAMQ92823 1304 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 COL1A2P08123 1366 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 DNAH12Q6ZR08 3092 aa20.71■□□□□ 0.91
CCDC189-212ENST00000546006 HOXC8P31273 242 aa20.7■□□□□ 0.9
CCDC189-212ENST00000546006 CDK7P50613 346 aa20.7■□□□□ 0.9
CCDC189-212ENST00000546006 ATN1P54259 1190 aaPredicted RBP20.7■□□□□ 0.9
CCDC189-212ENST00000546006 GRIK4Q16099 956 aa20.7■□□□□ 0.9
CCDC189-212ENST00000546006 TPRNQ4KMQ1 711 aa20.7■□□□□ 0.9
CCDC189-212ENST00000546006 PLA2G4FQ68DD2 849 aa20.7■□□□□ 0.9
CCDC189-212ENST00000546006 KCNK18Q7Z418 384 aa20.7■□□□□ 0.9
CCDC189-212ENST00000546006 SETD4Q9NVD3 440 aa20.7■□□□□ 0.9
CCDC189-212ENST00000546006 DBR1Q9UK59 544 aaKnown RBP20.7■□□□□ 0.9
CCDC189-212ENST00000546006 A0A087X0B3 334 aa20.69■□□□□ 0.9
CCDC189-212ENST00000546006 A0A1B0GVL5 298 aa20.69■□□□□ 0.9
CCDC189-212ENST00000546006 C17orf102A2RUQ5 167 aa20.69■□□□□ 0.9
CCDC189-212ENST00000546006 RRN3P2A6NIE6 340 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms