RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TFAP4Q01664 338 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 MTMR3Q13615 1198 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 COL19A1Q14993 1142 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 PTPN21Q16825 1174 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 ASTE1Q2TB18 679 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 ASPRV1Q53RT3 343 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 HYIQ5T013 277 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 CFAP58Q5T655 872 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 RC3H1Q5TC82 1133 aaKnown RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 ICE2Q659A1 982 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 ANKRD40Q6AI12 368 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 PPP4R3AQ6IN85 833 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 C8orf74Q6P047 294 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 PDXDC1Q6P996 788 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 KDM7AQ6ZMT4 941 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 MMS22LQ6ZRQ5 1243 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 CROCCP2Q86T23 111 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 C10orf67Q8IYJ2 551 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 ZNF444Q8N0Y2 327 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 NEDD1Q8NHV4 660 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 GTF3C2Q8WUA4 911 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-225ENST00000545920 LMBR1Q8WVP7 490 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 CDK5RAP3Q96JB5 506 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 PBKQ96KB5 322 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 LACRTQ9GZZ8 138 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 NT5C3AQ9H0P0 336 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 MKNK2Q9HBH9 465 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 GDF3Q9NR23 364 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 RSPH14Q9UHP6 348 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 FBXL5Q9UKA1 691 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 INTUQ9ULD6 942 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 MAP4K5Q9Y4K4 846 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 LAMB1P07942 1786 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 KIAA1551Q9HCM1 1747 aa7.12□□□□□ -1.27
SNHG1-225ENST00000545920 SLIT2O94813 1529 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 FAM205AQ6ZU69 1335 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 PITPNM2Q9BZ72 1349 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 GOLGA6L10A6NI86 522 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 RASSF10A6NK89 507 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 H3BRB1 525 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 CCDC188H7C350 402 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 AGPSO00116 658 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 KIAA0754O94854 1291 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 TSPY3P0CV98 308 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 TSPY8P0CW00 308 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 NPR3P17342 541 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 GYG1P46976 350 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 CDR1P51861 262 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 PMS1P54277 932 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 NAPAP54920 295 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 SETQ01105 290 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 LMNB2Q03252 620 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 EHHADHQ08426 723 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 ZNF211Q13398 564 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 BIRC3Q13489 604 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 NAB2Q15742 525 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 INF2Q27J81 1249 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 EDRF1Q3B7T1 1238 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 TMEM119Q4V9L6 283 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 KRT79Q5XKE5 535 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 DZIP1Q86YF9 867 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 ZC3H3Q8IXZ2 948 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 REXO1Q8N1G1 1221 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 LARP4BQ92615 738 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 LRRC45Q96CN5 670 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 ASB16Q96NS5 453 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 NLRP3Q96P20 1036 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 MTMR9Q96QG7 549 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 TMEM60Q9H2L4 133 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 TUT1Q9H6E5 874 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 SUGCTQ9HAC7 445 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 A1CFQ9NQ94 594 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 AGPAT5Q9NUQ2 364 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 MCM9Q9NXL9 1143 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 BTG4Q9NY30 223 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 AIPL1Q9NZN9 384 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 SEPT3Q9UH03 358 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 DIS3Q9Y2L1 958 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 PCDHGC5Q9Y5F6 944 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 COL4A3BPQ9Y5P4 624 aa7.11□□□□□ -1.27
SNHG1-225ENST00000545920 DNMT3AQ9Y6K1 912 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 TNRC6CQ9HCJ0 1690 aaKnown RBP7.11□□□□□ -1.27
SNHG1-225ENST00000545920 PHLPP1O60346 1717 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.1□□□□□ -1.27
SNHG1-225ENST00000545920 A0A0A6YYK5 440 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-225ENST00000545920 A0A0U1RQJ8 604 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 TRIM49BA6NDI0 452 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 KLRF2D3W0D1 207 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 PDE2AO00408 941 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-225ENST00000545920 ENC1O14682 589 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 ERLIN2O94905 339 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 TRIM37O94972 964 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 ABL1P00519 1130 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 LDHBP07195 334 aaKnown RBP7.1□□□□□ -1.27
SNHG1-225ENST00000545920 IGFBP4P22692 258 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 GBP1P32455 592 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 EIF4A3P38919 411 aaKnown RBP7.1□□□□□ -1.27
SNHG1-225ENST00000545920 GYS2P54840 703 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 NPEPPSP55786 919 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms