RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 CCDC138Q96M89 665 aa12.58□□□□□ -0.39
CIT-217ENST00000545913 HEXIM2Q96MH2 286 aaKnown RBP12.58□□□□□ -0.39
CIT-217ENST00000545913 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 NPR1P16066 1061 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 MTERF2Q49AM1 385 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 RASGRF2O14827 1237 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 MAPK13O15264 365 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 ZBTB17Q13105 803 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 SLC12A1Q13621 1099 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 SPOPLQ6IQ16 392 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 COA7Q96BR5 231 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 DBNDD1Q9H9R9 158 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 OLA1Q9NTK5 396 aaKnown RBP12.58□□□□□ -0.4
CIT-217ENST00000545913 SLC4A1P02730 911 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 TBC1D10BQ4KMP7 808 aaPredicted RBP12.58□□□□□ -0.4
CIT-217ENST00000545913 NLRP4Q96MN2 994 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 ADGRL3Q9HAR2 1447 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 KDM6BO15054 1643 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 PLS3P13797 630 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 LTKP29376 864 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 MXD3Q9BW11 206 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 UPF3AQ9H1J1 476 aaKnown RBP12.58□□□□□ -0.4
CIT-217ENST00000545913 PYCARDQ9ULZ3 195 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 ZMYND10O75800 440 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 ASNSP08243 561 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 PSMA2P25787 234 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 PAGE5Q96GU1 130 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 MSTO1Q9BUK6 570 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 KLC2Q9H0B6 622 aa12.58□□□□□ -0.4
CIT-217ENST00000545913 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.4
CIT-217ENST00000545913 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 NR1D1P20393 614 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 RC3H1Q5TC82 1133 aaKnown RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 RESP18Q5W5W9 173 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 EMBQ6PCB8 327 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 CRLF3Q8IUI8 442 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 GRAMD1CQ8IYS0 662 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 PUS7LQ9H0K6 701 aaKnown RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 PTCH1Q13635 1447 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 AP3B2Q13367 1082 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 DCAF4Q8WV16 495 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 HINFPQ9BQA5 517 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 ZBTB1Q9Y2K1 713 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 FTCDO95954 541 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 TMEM179Q6ZVK1 233 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 NOP9Q86U38 636 aaKnown RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 MAML1Q92585 1016 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 KLHL29Q96CT2 875 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 SLC13A4Q9UKG4 626 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 DCTN3O75935 186 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 KIAA1586Q9HCI6 787 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 MAP3K7O43318 606 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 CDK8P49336 464 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 GLE1Q53GS7 698 aaKnown RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 FBXL13Q8NEE6 735 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 EIF2AQ9BY44 585 aaKnown RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 ACTR5Q9H9F9 607 aaPredicted RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 CCDC188H7C350 402 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 USP17L8P0C7I0 530 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 CD58P19256 250 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 TAF1BQ53T94 588 aaPredicted RBP12.57□□□□□ -0.4
CIT-217ENST00000545913 ZBTB33Q86T24 672 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 ACRBPQ8NEB7 543 aa12.57□□□□□ -0.4
CIT-217ENST00000545913 GNAT1P11488 350 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 ZNF18P17022 549 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 EPHB1P54762 984 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 RWDD2BP57060 319 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 HP1BP3Q5SSJ5 553 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 TRAIPQ9BWF2 469 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 SAMSN1Q9NSI8 373 aaKnown RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 ARHGEF25Q86VW2 580 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 EXOC4Q96A65 974 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 VPS39Q96JC1 886 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 PACSIN2Q9UNF0 486 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 SKIP12755 728 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 TAC1P20366 129 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 ERICH1Q86X53 443 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 TRMT2AQ8IZ69 625 aaKnown RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 SEC31BQ9NQW1 1179 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 NCF2P19878 526 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 COA1Q9GZY4 146 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 QTRT2Q9H974 415 aaKnown RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 SCOCQ9UIL1 159 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 NPHP4O75161 1426 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 OCRLQ01968 901 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 NNTQ13423 1086 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 RTKN2Q8IZC4 609 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 MCPH1Q8NEM0 835 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 STRIP2Q9ULQ0 834 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 SOX5P35711 763 aa12.56□□□□□ -0.4
CIT-217ENST00000545913 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 ORC2Q13416 577 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.56□□□□□ -0.4
CIT-217ENST00000545913 RBM41Q96IZ5 413 aaKnown RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 MYCBPQ99417 103 aaPredicted RBP12.56□□□□□ -0.4
CIT-217ENST00000545913 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms