RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SLC26A2P50443 739 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 MRPS5P82675 430 aaKnown RBP24■■□□□ 1.43
SCARB1-210ENST00000545493 TFF2Q03403 129 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 POTEBQ6S5H4 581 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 TSHZ1Q6ZSZ6 1077 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 LINC01599Q8WXQ3 324 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 YME1L1Q96TA2 773 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 LARP6Q9BRS8 491 aaKnown RBP24■■□□□ 1.43
SCARB1-210ENST00000545493 ZNF577Q9BSK1 485 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 AGO3Q9H9G7 860 aaKnown RBP24■■□□□ 1.43
SCARB1-210ENST00000545493 RC3H2Q9HBD1 1191 aaKnown RBP24■■□□□ 1.43
SCARB1-210ENST00000545493 PCDHA2Q9Y5H9 948 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 WDR81Q562E7 1941 aa24■■□□□ 1.43
SCARB1-210ENST00000545493 BACH1O14867 736 aa23.99■■□□□ 1.43
SCARB1-210ENST00000545493 TMEM62Q0P6H9 643 aa23.99■■□□□ 1.43
SCARB1-210ENST00000545493 SKIV2LQ15477 1246 aaKnown RBP23.99■■□□□ 1.43
SCARB1-210ENST00000545493 BICD2Q8TD16 824 aa23.99■■□□□ 1.43
SCARB1-210ENST00000545493 ATP8B4Q8TF62 1192 aa23.99■■□□□ 1.43
SCARB1-210ENST00000545493 ZNF302Q9NR11 478 aa23.99■■□□□ 1.43
SCARB1-210ENST00000545493 TRPV2Q9Y5S1 764 aa23.99■■□□□ 1.43
SCARB1-210ENST00000545493 ATG2AQ2TAZ0 1938 aa23.99■■□□□ 1.43
SCARB1-210ENST00000545493 RPLP2P05387 115 aaKnown RBP23.98■■□□□ 1.43
SCARB1-210ENST00000545493 ATP4AP20648 1035 aa23.98■■□□□ 1.43
SCARB1-210ENST00000545493 PRR16Q569H4 304 aa23.98■■□□□ 1.43
SCARB1-210ENST00000545493 FAM160B1Q5W0V3 765 aa23.98■■□□□ 1.43
SCARB1-210ENST00000545493 MTHFD1LQ6UB35 978 aa23.98■■□□□ 1.43
SCARB1-210ENST00000545493 TSPYL2Q9H2G4 693 aaPredicted RBP23.98■■□□□ 1.43
SCARB1-210ENST00000545493 ZBTB42B2RXF5 422 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 COL1A2P08123 1366 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 CD52P31358 61 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 ZNF746Q6NUN9 644 aaPredicted RBP23.97■■□□□ 1.43
SCARB1-210ENST00000545493 MIS18BP1Q6P0N0 1132 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 FBXO22Q8NEZ5 403 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 ADAMTS19Q8TE59 1207 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 TNPO1Q92973 898 aaKnown RBP23.97■■□□□ 1.43
SCARB1-210ENST00000545493 ZNF274Q96GC6 653 aaPredicted RBP23.97■■□□□ 1.43
SCARB1-210ENST00000545493 SH3GLB2Q9NR46 395 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 TBC1D22BQ9NU19 505 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 LMCD1Q9NZU5 365 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 IGSF9BQ9UPX0 1349 aa23.97■■□□□ 1.43
SCARB1-210ENST00000545493 TTC3P53804 2025 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 MYH9P35579 1960 aaKnown RBP23.96■■□□□ 1.43
SCARB1-210ENST00000545493 KIAA1671Q9BY89 1806 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 SMIM35A0A1B0GVV1 85 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 HBP1O60381 514 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 STK3Q13188 491 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 NPY5RQ15761 445 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 PDXDC2PQ6P474 469 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 SMAP1Q8IYB5 467 aaPredicted RBP23.96■■□□□ 1.43
SCARB1-210ENST00000545493 TRIM22Q8IYM9 498 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 PPP4R2Q9NY27 417 aa23.96■■□□□ 1.43
SCARB1-210ENST00000545493 KDM3AQ9Y4C1 1321 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 DEXIO95424 95 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 LINC00271P0C7V0 271 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 KCNQ1P51787 676 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 NLRP5P59047 1200 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 KRT76Q01546 638 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 SSRP1Q08945 709 aaKnown RBP23.95■■□□□ 1.42
SCARB1-210ENST00000545493 EPC2Q52LR7 807 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 IER5Q5VY09 327 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 SWSAP1Q6NVH7 229 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 AIFM3Q96NN9 605 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 PDRG1Q9NUG6 133 aa23.95■■□□□ 1.42
SCARB1-210ENST00000545493 MAFBQ9Y5Q3 323 aaPredicted RBP23.95■■□□□ 1.42
SCARB1-210ENST00000545493 ADGRA3Q8IWK6 1321 aa23.94■■□□□ 1.42
SCARB1-210ENST00000545493 M0R2N6 131 aa23.94■■□□□ 1.42
SCARB1-210ENST00000545493 MSH4O15457 936 aa23.94■■□□□ 1.42
SCARB1-210ENST00000545493 SAMD11Q96NU1 681 aa23.94■■□□□ 1.42
SCARB1-210ENST00000545493 PCDHA4Q9UN74 947 aa23.94■■□□□ 1.42
SCARB1-210ENST00000545493 SQORQ9Y6N5 450 aa23.94■■□□□ 1.42
SCARB1-210ENST00000545493 TCF20Q9UGU0 1960 aaKnown RBP23.94■■□□□ 1.42
SCARB1-210ENST00000545493 M0QZ92 97 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 ENPP3O14638 875 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 CPLX1O14810 134 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 C22orf31O95567 290 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 KLRC1P26715 233 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 SCRN1Q12765 414 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 DAGLBQ8NCG7 672 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 TBCKQ8TEA7 893 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 UHRF1Q96T88 793 aaPredicted RBP23.93■■□□□ 1.42
SCARB1-210ENST00000545493 CELF4Q9BZC1 486 aaKnown RBP23.93■■□□□ 1.42
SCARB1-210ENST00000545493 PADI3Q9ULW8 664 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 EVPLQ92817 2033 aa23.93■■□□□ 1.42
SCARB1-210ENST00000545493 BRWD1Q9NSI6 2320 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 PAK2Q13177 524 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 ZNF484Q5JVG2 852 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 TMEM192Q8IY95 271 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 IL17RAQ96F46 866 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 GABBR1Q9UBS5 961 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 TCEAL9Q9UHQ7 104 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 COG5Q9UP83 839 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 PCDHA10Q9Y5I2 948 aa23.92■■□□□ 1.42
SCARB1-210ENST00000545493 WDR64B1ANS9 1081 aa23.91■■□□□ 1.42
SCARB1-210ENST00000545493 TNFRSF10AO00220 468 aa23.91■■□□□ 1.42
SCARB1-210ENST00000545493 TDP2O95551 362 aa23.91■■□□□ 1.42
SCARB1-210ENST00000545493 PSAPP07602 524 aa23.91■■□□□ 1.42
SCARB1-210ENST00000545493 BMP1P13497 986 aa23.91■■□□□ 1.42
SCARB1-210ENST00000545493 USP11P51784 963 aa23.91■■□□□ 1.42
SCARB1-210ENST00000545493 TMEM266Q2M3C6 531 aa23.91■■□□□ 1.42
SCARB1-210ENST00000545493 RTN4RL1Q86UN2 441 aaPredicted RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms