RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 TMEM63BQ5T3F8 832 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 ARL6IP4Q66PJ3 421 aaKnown RBP13.35□□□□□ -0.27
LTBR-214ENST00000545445 METTL7BQ6UX53 244 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 POTEDQ86YR6 584 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 SLC5A5Q92911 643 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 MTMR9Q96QG7 549 aa13.35□□□□□ -0.27
LTBR-214ENST00000545445 TRMT13Q9NUP7 481 aaKnown RBP13.35□□□□□ -0.27
LTBR-214ENST00000545445 MCM3APO60318 1980 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 WNT7AO00755 349 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 GAS7O60861 476 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 YEATS4O95619 227 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 GGPS1O95749 300 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 PFKMP08237 780 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 OR52Z1P0C646 297 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 UBA1P22314 1058 aaKnown RBP13.34□□□□□ -0.27
LTBR-214ENST00000545445 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
LTBR-214ENST00000545445 KRT85P78386 507 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 ATP2C1P98194 919 aaPredicted RBP13.34□□□□□ -0.27
LTBR-214ENST00000545445 KRT76Q01546 638 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 PTGDRQ13258 359 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 SF3A1Q15459 793 aaKnown RBP13.34□□□□□ -0.27
LTBR-214ENST00000545445 BRDTQ58F21 947 aaPredicted RBP13.34□□□□□ -0.27
LTBR-214ENST00000545445 LRCH2Q5VUJ6 765 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 FAM173BQ6P4H8 233 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
LTBR-214ENST00000545445 C4orf32Q8N8J7 132 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 TEKT3Q9BXF9 490 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 MLXIPQ9HAP2 919 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 PCDHA12Q9UN75 941 aa13.34□□□□□ -0.27
LTBR-214ENST00000545445 ZEB2O60315 1214 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 ATP9AO75110 1047 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 PSMD10O75832 226 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 ARIH2O95376 493 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 SP2Q02086 613 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 ITGB3BPQ13352 177 aaPredicted RBP13.33□□□□□ -0.28
LTBR-214ENST00000545445 NBR1Q14596 966 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 SLC39A14Q15043 492 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 TMEM266Q2M3C6 531 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 ZNF746Q6NUN9 644 aaPredicted RBP13.33□□□□□ -0.28
LTBR-214ENST00000545445 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 OR6J1Q8NGC5 347 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 HAS1Q92839 578 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 USP28Q96RU2 1077 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 SLC9A7Q96T83 725 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 RAB34Q9BZG1 259 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
LTBR-214ENST00000545445 TMEM60Q9H2L4 133 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 JPH1Q9HDC5 661 aaPredicted RBP13.33□□□□□ -0.28
LTBR-214ENST00000545445 SLC9A2Q9UBY0 812 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 CLIC4Q9Y696 253 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 KIAA1217Q5T5P2 1943 aa13.33□□□□□ -0.28
LTBR-214ENST00000545445 PI4K2BG5E9Z4 385 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 DHX15O43143 795 aaKnown RBP13.32□□□□□ -0.28
LTBR-214ENST00000545445 LPXNO60711 386 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 ACTN1P12814 892 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 SFNP31947 248 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 CPT1AP50416 773 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 DNM1Q05193 864 aaKnown RBP13.32□□□□□ -0.28
LTBR-214ENST00000545445 ARHGAP1Q07960 439 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 PPP2R5CQ13362 524 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 PDIA5Q14554 519 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 STK38Q15208 465 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 PTPAQ15257 358 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 SMAP1Q8IYB5 467 aaPredicted RBP13.32□□□□□ -0.28
LTBR-214ENST00000545445 LINC00301Q8NCQ3 95 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 PPTC7Q8NI37 304 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 KCNG4Q8TDN1 519 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 GDPD5Q8WTR4 605 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 SEZ6LQ9BYH1 1024 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 TTC12Q9H892 705 aaPredicted RBP13.32□□□□□ -0.28
LTBR-214ENST00000545445 TFIP11Q9UBB9 837 aaKnown RBP13.32□□□□□ -0.28
LTBR-214ENST00000545445 STK24Q9Y6E0 443 aa13.32□□□□□ -0.28
LTBR-214ENST00000545445 COL4A4P53420 1690 aaPredicted RBP13.31□□□□□ -0.28
LTBR-214ENST00000545445 A6NJR5 290 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 WDR64B1ANS9 1081 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 NOP56O00567 594 aaKnown RBP13.31□□□□□ -0.28
LTBR-214ENST00000545445 KPNA6O60684 536 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 PPP6R2O75170 966 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 TXKP42681 527 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 MRE11P49959 708 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
LTBR-214ENST00000545445 JAK3P52333 1124 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 FOXD4L6Q3SYB3 417 aaPredicted RBP13.31□□□□□ -0.28
LTBR-214ENST00000545445 B3GNT9Q6UX72 402 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 FOXD4L3Q6VB84 417 aaPredicted RBP13.31□□□□□ -0.28
LTBR-214ENST00000545445 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 SPATA33Q96N06 139 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 UIMC1Q96RL1 719 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 RCOR1Q9UKL0 485 aa13.31□□□□□ -0.28
LTBR-214ENST00000545445 LCHNA4D1U4 455 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 PRR33A8MZF0 331 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 SPTLC2O15270 562 aa13.3□□□□□ -0.28
LTBR-214ENST00000545445 NCLP19338 710 aaKnown RBP13.3□□□□□ -0.28
LTBR-214ENST00000545445 CEBPZQ03701 1054 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms