RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 PAN2Q504Q3 1202 aaKnown RBP14.75□□□□□ -0.05
USP28-212ENST00000544750 IER5Q5VY09 327 aa14.75□□□□□ -0.05
USP28-212ENST00000544750 B4GALNT3Q6L9W6 998 aa14.75□□□□□ -0.05
USP28-212ENST00000544750 CDHR1Q96JP9 859 aa14.75□□□□□ -0.05
USP28-212ENST00000544750 TRPV2Q9Y5S1 764 aa14.75□□□□□ -0.05
USP28-212ENST00000544750 UBIAD1Q9Y5Z9 338 aa14.75□□□□□ -0.05
USP28-212ENST00000544750 TAF6LQ9Y6J9 622 aa14.75□□□□□ -0.05
USP28-212ENST00000544750 RIF1Q5UIP0 2472 aaKnown RBP14.75□□□□□ -0.05
USP28-212ENST00000544750 FAM186AA6NE01 2351 aa14.75□□□□□ -0.05
USP28-212ENST00000544750 SMARCA1P28370 1054 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 AVPR2P30518 371 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 ANTXR2P58335 489 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 UBE3AQ05086 875 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 WTAPQ15007 396 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 DUSP6Q16828 381 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 TMEM184AQ6ZMB5 413 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 IGDCC4Q8TDY8 1250 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 PIBF1Q8WXW3 757 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 GLG1Q92896 1179 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 CUL5Q93034 780 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 RPGRIP1Q96KN7 1286 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 MAP3K14Q99558 947 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 FAM49AQ9H0Q0 323 aaPredicted RBP14.74□□□□□ -0.05
USP28-212ENST00000544750 S1PR5Q9H228 398 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 TLE6Q9H808 572 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 FAM86C1Q9NVL1 165 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 PCDHA2Q9Y5H9 948 aa14.74□□□□□ -0.05
USP28-212ENST00000544750 FSCN2O14926 492 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 PER2O15055 1255 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 GFRA3O60609 400 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 SARSP49591 514 aaKnown RBP14.73□□□□□ -0.05
USP28-212ENST00000544750 ERVFC1P60507 584 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 IGBP1P78318 339 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 TMEM62Q0P6H9 643 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 TRDNQ13061 729 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 CELF4Q9BZC1 486 aaKnown RBP14.73□□□□□ -0.05
USP28-212ENST00000544750 VPS13AQ96RL7 3174 aa14.73□□□□□ -0.05
USP28-212ENST00000544750 SMIM35A0A1B0GVV1 85 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 MAFGO15525 162 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 MGEA5O60502 916 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 PTH1RQ03431 593 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 PAK2Q13177 524 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 PLCB4Q15147 1175 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 PTPN21Q16825 1174 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 FAM43BQ6ZT52 329 aaPredicted RBP14.72□□□□□ -0.05
USP28-212ENST00000544750 RASGRP4Q8TDF6 673 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 TRAPPC12Q8WVT3 735 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 CDCA3Q99618 268 aaPredicted RBP14.72□□□□□ -0.05
USP28-212ENST00000544750 JADE2Q9NQC1 790 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 TLR9Q9NR96 1032 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 DCHS1Q96JQ0 3298 aa14.72□□□□□ -0.05
USP28-212ENST00000544750 ERICH2A1L162 156 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 FSD2A1L4K1 749 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 PROB1E7EW31 1015 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 E7EWF7 191 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 PPFIA3O75145 1194 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 MTMR1Q13613 665 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 SYCE2Q6PIF2 218 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 PLPPR4Q7Z2D5 763 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 CATIPQ7Z7H3 387 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 MB21D2Q8IYB1 491 aaPredicted RBP14.71□□□□□ -0.05
USP28-212ENST00000544750 NME8Q8N427 588 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 NCOA7Q8NI08 942 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 RRP36Q96EU6 259 aaKnown RBP14.71□□□□□ -0.05
USP28-212ENST00000544750 NEK1Q96PY6 1258 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 IRF2BPLQ9H1B7 796 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 ERVK-5Q9HDB9 667 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 PKD2L1Q9P0L9 805 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 HCSTQ9UBK5 93 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 PCDHB12Q9Y5F1 795 aa14.71□□□□□ -0.05
USP28-212ENST00000544750 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
USP28-212ENST00000544750 C9IYK1 514 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 M0QZ92 97 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 FGF18O76093 207 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 PDGFBP01127 241 aaPredicted RBP14.7□□□□□ -0.06
USP28-212ENST00000544750 NUBP1P53384 320 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 SART3Q15020 963 aaKnown RBP14.7□□□□□ -0.06
USP28-212ENST00000544750 TMEM266Q2M3C6 531 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 FAM102BQ5T8I3 360 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 PDE12Q6L8Q7 609 aaKnown RBP14.7□□□□□ -0.06
USP28-212ENST00000544750 ZNF654Q8IZM8 581 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 SRBD1Q8N5C6 995 aaKnown RBP14.7□□□□□ -0.06
USP28-212ENST00000544750 RIPOR3Q96MK2 946 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 MYL10Q9BUA6 226 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 CWH43Q9H720 699 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 PSTPIP2Q9H939 334 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 LY9Q9HBG7 655 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 JPH1Q9HDC5 661 aaPredicted RBP14.7□□□□□ -0.06
USP28-212ENST00000544750 RGS18Q9NS28 235 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 SLC9A2Q9UBY0 812 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 LRFN2Q9ULH4 789 aa14.7□□□□□ -0.06
USP28-212ENST00000544750 DENND4AQ7Z401 1863 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 DDAH1O94760 285 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 ATG7O95352 703 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 PLEKHA8P1O95397 391 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 KRT76Q01546 638 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 UBE2SQ16763 222 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 ANKRD54Q6NXT1 300 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 MTHFD1LQ6UB35 978 aa14.69□□□□□ -0.06
USP28-212ENST00000544750 RALYLQ86SE5 291 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms