RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 PHACTR2O75167 634 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 FAM13AO94988 1023 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 NR3C1P04150 777 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 SPATA31C1P0DKV0 1188 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 LMNB1P20700 586 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 STAT1P42224 750 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 GYS2P54840 703 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 ALCAMQ13740 583 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 PPP2R5AQ15172 486 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 SPATS2Q86XZ4 545 aaKnown RBP14.27□□□□□ -0.13
CPSF7-223ENST00000544669 CD302Q8IX05 232 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 FAM133AQ8N9E0 248 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 CHURC1Q8WUH1 139 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 REEP2Q9BRK0 252 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 GOPCQ9HD26 462 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 KCNQ5Q9NR82 932 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 TMOD2Q9NZR1 351 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 PCDHB13Q9Y5F0 798 aa14.27□□□□□ -0.13
CPSF7-223ENST00000544669 A0A087X0T9 212 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 POTEFA5A3E0 1075 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 BUB1O43683 1085 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 PLA2G6O60733 806 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 H2AFZP0C0S5 128 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 FAM228BP0C875 321 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 SETQ01105 290 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-223ENST00000544669 NFIAQ12857 509 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 PABPC4Q13310 644 aaKnown RBP eCLIP14.26□□□□□ -0.13
CPSF7-223ENST00000544669 DNAJC21Q5F1R6 531 aaKnown RBP14.26□□□□□ -0.13
CPSF7-223ENST00000544669 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 POTEGQ6S5H5 508 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 POTEEQ6S8J3 1075 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 H2AFVQ71UI9 128 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 IRF2BP2Q7Z5L9 587 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 SFR1Q86XK3 245 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 GLIS3Q8NEA6 775 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 NACC1Q96RE7 527 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 NAP1L3Q99457 506 aaPredicted RBP14.26□□□□□ -0.13
CPSF7-223ENST00000544669 AFF2P51816 1311 aa14.26□□□□□ -0.13
CPSF7-223ENST00000544669 ZC3H4Q9UPT8 1303 aaKnown RBP14.26□□□□□ -0.13
CPSF7-223ENST00000544669 NDUFB10O96000 172 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 KLRC1P26715 233 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 PON1P27169 355 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 MATR3P43243 847 aaKnown RBP eCLIP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 PPP2R5CQ13362 524 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 DACT2Q5SW24 774 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 ALKBH5Q6P6C2 394 aaKnown RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 CLEC10AQ8IUN9 316 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 CCDC26Q8TAB7 109 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 LRRC45Q96CN5 670 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 EIF2AK1Q9BQI3 630 aaKnown RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 DNAJC18Q9H819 358 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 DMGDHQ9UI17 866 aaKnown RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 FRMD4BQ9Y2L6 1034 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 MRPL11Q9Y3B7 192 aaKnown RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 SHTN1A0MZ66 631 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 SRRM3A6NNA2 597 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 GCOM1H8Y6P7 765 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 AGPSO00116 658 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 MSH4O15457 936 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 GCNT3O95395 438 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 POLR2MP0CAP2 368 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 STAT2P52630 851 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 SNRPFP62306 86 aaKnown RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 CETN1Q12798 172 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 EPHA7Q15375 998 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 EMC10Q5UCC4 262 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 KRT27Q7Z3Y8 459 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 MAATS1Q7Z4T9 603 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 SRLQ86TD4 932 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 FAM160B2Q86V87 743 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 ARFGAP2Q8N6H7 521 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 ANKRD13CQ8N6S4 541 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 LENG9Q96B70 501 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 RASSF4Q9H2L5 321 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 BHMT2Q9H2M3 363 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 PARVGQ9HBI0 331 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 RBM12Q9NTZ6 932 aaKnown RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 SUCLA2Q9P2R7 463 aaPredicted RBP14.25□□□□□ -0.13
CPSF7-223ENST00000544669 FAM198AQ9UFP1 575 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 NAGPAQ9UK23 515 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 VAV3Q9UKW4 847 aa14.25□□□□□ -0.13
CPSF7-223ENST00000544669 GOLGA6L10A6NI86 522 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 H0YIN7 160 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 NKRFO15226 690 aaKnown RBP eCLIP14.24□□□□□ -0.13
CPSF7-223ENST00000544669 ZMYND10O75800 440 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 HEXIM1O94992 359 aaKnown RBP14.24□□□□□ -0.13
CPSF7-223ENST00000544669 KIF4AO95239 1232 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 MAPTP10636 758 aaKnown RBP14.24□□□□□ -0.13
CPSF7-223ENST00000544669 CXCR5P32302 372 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 NOP2P46087 812 aaKnown RBP14.24□□□□□ -0.13
CPSF7-223ENST00000544669 SKOR1P84550 965 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 PTK2Q05397 1052 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 MTMR3Q13615 1198 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 TNIP1Q15025 636 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 TCERG1LQ5VWI1 586 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 LRIG3Q6UXM1 1119 aa14.24□□□□□ -0.13
CPSF7-223ENST00000544669 SLC51AQ86UW1 340 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms