RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 INPP4AQ96PE3 977 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-209ENST00000544349 NACC1Q96RE7 527 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 PAGR1Q9BTK6 254 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 SRRTQ9BXP5 876 aaKnown RBP15.85■□□□□ 0.13
VPS33A-209ENST00000544349 WRAP73Q9P2S5 460 aaPredicted RBP15.85■□□□□ 0.13
VPS33A-209ENST00000544349 PCDHA2Q9Y5H9 948 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 N4BP3O15049 544 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 CCDC175P0C221 793 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 OSBPP22059 807 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 CASQ1P31415 396 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 ERVK-24P63145 666 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 NOC3LQ8WTT2 800 aaKnown RBP15.85■□□□□ 0.13
VPS33A-209ENST00000544349 LXNQ9BS40 222 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 SEMA6BQ9H3T3 888 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 THAP9Q9H5L6 903 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 LZTFL1Q9NQ48 299 aa15.85■□□□□ 0.13
VPS33A-209ENST00000544349 KIAA1217Q5T5P2 1943 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 PFASO15067 1338 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 STAM2O75886 525 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 FECHP22830 423 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 CLCN6P51797 869 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 HERC4Q5GLZ8 1057 aaPredicted RBP15.84■□□□□ 0.13
VPS33A-209ENST00000544349 RINT1Q6NUQ1 792 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 NCAPG2Q86XI2 1143 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 CREBRFQ8IUR6 639 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 CSGALNACT2Q8N6G5 542 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 BANK1Q8NDB2 785 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 GLIS3Q8NEA6 775 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 ACRBPQ8NEB7 543 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 DNERQ8NFT8 737 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 REEP2Q9BRK0 252 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 MOV10L1Q9BXT6 1211 aaKnown RBP15.84■□□□□ 0.13
VPS33A-209ENST00000544349 EPC1Q9H2F5 836 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 MRFAP1Q9Y605 127 aa15.84■□□□□ 0.13
VPS33A-209ENST00000544349 ZBTB39O15060 712 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 RGS20O76081 388 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 P4HBP07237 508 aaKnown RBP15.83■□□□□ 0.13
VPS33A-209ENST00000544349 LRRC41Q15345 812 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 MNS1Q8NEH6 495 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 ANKRD20A12PQ8NF67 263 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 IWS1Q96ST2 819 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 RUSC1Q9BVN2 902 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 RBPJLQ9UBG7 517 aa15.83■□□□□ 0.13
VPS33A-209ENST00000544349 LOXHD1Q8IVV2 1947 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 FKBP1BP68106 108 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 CNTN2Q02246 1040 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 CNGA4Q8IV77 575 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 MYOCDQ8IZQ8 938 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 TXNRD2Q9NNW7 524 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 ABHD10Q9NUJ1 306 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 TBC1D7Q9P0N9 293 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 SAMM50Q9Y512 469 aa15.83■□□□□ 0.12
VPS33A-209ENST00000544349 SLC25A27O95847 323 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 ABL1P00519 1130 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 EEF1GP26641 437 aaKnown RBP15.82■□□□□ 0.12
VPS33A-209ENST00000544349 KRT76Q01546 638 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 C1orf186Q6ZWK4 172 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 NAA15Q9BXJ9 866 aaKnown RBP15.82■□□□□ 0.12
VPS33A-209ENST00000544349 FGFBP2Q9BYJ0 223 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 ZHX3Q9H4I2 956 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 ZSWIM4Q9H7M6 989 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 GBA2Q9HCG7 927 aaPredicted RBP15.82■□□□□ 0.12
VPS33A-209ENST00000544349 ASTN1O14525 1302 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 ERCC3P19447 782 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 JAK3P52333 1124 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 PPP2R3AQ06190 1150 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 Q3C1V9 767 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 FOXR2Q6PJQ5 311 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 CDHR1Q96JP9 859 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 FAM53CQ9NYF3 392 aa15.82■□□□□ 0.12
VPS33A-209ENST00000544349 CCNE2O96020 404 aa15.81■□□□□ 0.12
VPS33A-209ENST00000544349 KCNA2P16389 499 aa15.81■□□□□ 0.12
VPS33A-209ENST00000544349 SFNP31947 248 aa15.81■□□□□ 0.12
VPS33A-209ENST00000544349 QARSP47897 775 aaKnown RBP15.81■□□□□ 0.12
VPS33A-209ENST00000544349 ALDH5A1P51649 535 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-209ENST00000544349 LRRC63Q05C16 580 aa15.81■□□□□ 0.12
VPS33A-209ENST00000544349 STXBP2Q15833 593 aa15.81■□□□□ 0.12
VPS33A-209ENST00000544349 UBXN4Q92575 508 aa15.81■□□□□ 0.12
VPS33A-209ENST00000544349 MAGEC2Q9UBF1 373 aaPredicted RBP15.81■□□□□ 0.12
VPS33A-209ENST00000544349 TCEAL9Q9UHQ7 104 aa15.81■□□□□ 0.12
VPS33A-209ENST00000544349 WDR64B1ANS9 1081 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 RSPH10B2B2RC85 870 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 SPATA31C2B4DYI2 1134 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 POTEB2H3BUK9 544 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 KIF20AO95235 890 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 LYPLA2O95372 231 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 RSPH10BP0C881 870 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 COPB2P35606 906 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 UBXN1Q04323 297 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 DMTNQ08495 405 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 GNPTABQ3T906 1256 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 ZNF746Q6NUN9 644 aaPredicted RBP15.8■□□□□ 0.12
VPS33A-209ENST00000544349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.8■□□□□ 0.12
VPS33A-209ENST00000544349 SFR1Q86XK3 245 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 FAM114A1Q8IWE2 563 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 CCDC51Q96ER9 411 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 EEF2KMTQ96G04 330 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 SENP7Q9BQF6 1050 aa15.8■□□□□ 0.12
VPS33A-209ENST00000544349 R3HDMLQ9H3Y0 253 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms