RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 PPFIA1Q13136 1202 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ZRSR1Q15695 479 aaKnown RBP16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SPECC1Q5M775 1068 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CATSPER3Q86XQ3 398 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ATP8B4Q8TF62 1192 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 LEO1Q8WVC0 666 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 BBXQ8WY36 941 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 HSD17B14Q9BPX1 270 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 POLR3CQ9BUI4 534 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SEZ6LQ9BYH1 1024 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 NRBP2Q9NSY0 501 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SEPT9Q9UHD8 586 aaPredicted RBP16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 RCOR1Q9UKL0 485 aa16.22■□□□□ 0.19
TNFRSF1A-216ENST00000543995 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 MED24O75448 989 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 RPA1P27694 616 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 UBA7P41226 1012 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 IGBP1P78318 339 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 LRRC26Q2I0M4 334 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 XKR3Q5GH77 459 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 SETD4Q9NVD3 440 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 WRAP73Q9P2S5 460 aaPredicted RBP16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 ATP11BQ9Y2G3 1177 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 MROH7Q68CQ1 1323 aa16.21■□□□□ 0.19
TNFRSF1A-216ENST00000543995 C17orf102A2RUQ5 167 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PQBP1O60828 265 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CUTAO60888 179 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SPATA31C1P0DKV0 1188 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 GNAT1P11488 350 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 INSRRP14616 1297 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 YWHABP31946 246 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TXLNAP40222 546 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 RTP1P59025 263 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PTPN11Q06124 597 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 GRIK4Q16099 956 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TRIM60Q495X7 471 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CABP7Q86V35 215 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SESTD1Q86VW0 696 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 C4orf19Q8IY42 314 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SLC43A3Q8NBI5 491 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 NRCAMQ92823 1304 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CALML4Q96GE6 196 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CCDC43Q96MW1 224 aaKnown RBP16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 HTATIP2Q9BUP3 242 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PCDHA7Q9UN72 937 aa16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TRIP12Q14669 1992 aaPredicted RBP16.2■□□□□ 0.18
TNFRSF1A-216ENST00000543995 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TLR3O15455 904 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CDK7P50613 346 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SNX17Q15036 470 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PTGISQ16647 500 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 C1orf53Q5VUE5 145 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 GDF6Q6KF10 455 aaPredicted RBP16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 OTUD6AQ7L8S5 288 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SYMPKQ92797 1274 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TRMT13Q9NUP7 481 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 KIAA1024Q9UPX6 916 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 NOD1Q9Y239 953 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TMEM150BA6NC51 233 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 RRN3P2A6NIE6 340 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 DCDC2CA8MYV0 355 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 B4GALT4O60513 344 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 MUTP22033 750 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 MTERF2Q49AM1 385 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TPRNQ4KMQ1 711 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ZNF484Q5JVG2 852 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PLA2G4FQ68DD2 849 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ANO5Q75V66 913 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ZNF579Q8NAF0 562 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PIGOQ8TEQ8 1089 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 LMBR1Q8WVP7 490 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TRAPPC12Q8WVT3 735 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 EPSTI1Q96J88 318 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 NACC1Q96RE7 527 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 PLIN2Q99541 437 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 SH2D3AQ9BRG2 576 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 NT5C3AQ9H0P0 336 aa16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 DDX19AQ9NUU7 478 aaKnown RBP16.19■□□□□ 0.18
TNFRSF1A-216ENST00000543995 COL1A2P08123 1366 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 A0A087WWV3 80 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ZBTB39O15060 712 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 STBD1O95210 358 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 LYPLA2O95372 231 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ZNF200P98182 395 aaPredicted RBP16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TLE2Q04725 743 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 ECM1Q16610 540 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 XKR9Q5GH70 373 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 USP49Q70CQ1 688 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 FAM126BQ8IXS8 530 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CEP170P1Q96L14 293 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 NIFKQ9BYG3 293 aaKnown RBP16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CCSER1Q9C0I3 900 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 TRPV6Q9H1D0 765 aa16.18■□□□□ 0.18
TNFRSF1A-216ENST00000543995 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms