RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 ERVK-9P63128 1117 aa21.96■■□□□ 1.11
COPS7A-218ENST00000543939 ERVK-24P63145 666 aa21.96■■□□□ 1.11
COPS7A-218ENST00000543939 SMAP1Q8IYB5 467 aaPredicted RBP21.96■■□□□ 1.11
COPS7A-218ENST00000543939 EEF2KMTQ96G04 330 aa21.96■■□□□ 1.11
COPS7A-218ENST00000543939 MROH8Q9H579 483 aa21.96■■□□□ 1.11
COPS7A-218ENST00000543939 BCAS3Q9H6U6 928 aa21.96■■□□□ 1.11
COPS7A-218ENST00000543939 NMRK2Q9NPI5 230 aa21.96■■□□□ 1.11
COPS7A-218ENST00000543939 PCDHA10Q9Y5I2 948 aa21.96■■□□□ 1.11
COPS7A-218ENST00000543939 TRPM7Q96QT4 1865 aa21.95■■□□□ 1.11
COPS7A-218ENST00000543939 CCL15-CCL14A0A0B4J2E2 113 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 CYP2C8P10632 490 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 NOLC1Q14978 699 aaKnown RBP eCLIP21.95■■□□□ 1.1
COPS7A-218ENST00000543939 CCL15Q16663 113 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 PADI6Q6TGC4 694 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 NELFCDQ8IXH7 590 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 SHCBP1Q8NEM2 672 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 BRI3BPQ8WY22 251 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 TUBGCP2Q9BSJ2 902 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 POLD4Q9HCU8 107 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 JPH1Q9HDC5 661 aaPredicted RBP21.95■■□□□ 1.1
COPS7A-218ENST00000543939 SPTLC3Q9NUV7 552 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 SLC9A2Q9UBY0 812 aa21.95■■□□□ 1.1
COPS7A-218ENST00000543939 DNAJC25-GNG10A0A024R161 153 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 BTBD19C9JJ37 291 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 PDHXO00330 501 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 YWHABP31946 246 aaKnown RBP21.94■■□□□ 1.1
COPS7A-218ENST00000543939 RARRES1P49788 294 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 BMT2Q1RMZ1 405 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 ZNF507Q8TCN5 953 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 MRPL44Q9H9J2 332 aaKnown RBP21.94■■□□□ 1.1
COPS7A-218ENST00000543939 PARVGQ9HBI0 331 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 SEL1LQ9UBV2 794 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 SFI1A8K8P3 1242 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 MYBP10242 640 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 FKBP3Q00688 224 aaKnown RBP21.94■■□□□ 1.1
COPS7A-218ENST00000543939 SP2Q02086 613 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 MKRN3Q13064 507 aaKnown RBP21.94■■□□□ 1.1
COPS7A-218ENST00000543939 MAPK7Q13164 816 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 SPRYD7Q5W111 196 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 ANKRD23Q86SG2 305 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 FGD4Q96M96 766 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 MMP19Q99542 508 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 TMX1Q9H3N1 280 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 ANKEF1Q9NU02 776 aa21.94■■□□□ 1.1
COPS7A-218ENST00000543939 MYH9P35579 1960 aaKnown RBP21.93■■□□□ 1.1
COPS7A-218ENST00000543939 HOXD13P35453 343 aa21.93■■□□□ 1.1
COPS7A-218ENST00000543939 MTIF2P46199 727 aaKnown RBP21.93■■□□□ 1.1
COPS7A-218ENST00000543939 UBXN1Q04323 297 aa21.93■■□□□ 1.1
COPS7A-218ENST00000543939 KCTD2Q14681 263 aa21.93■■□□□ 1.1
COPS7A-218ENST00000543939 PPP4R3CPQ6ZMV5 832 aa21.93■■□□□ 1.1
COPS7A-218ENST00000543939 ZC3H3Q8IXZ2 948 aaKnown RBP21.93■■□□□ 1.1
COPS7A-218ENST00000543939 MYCT1Q8N699 235 aa21.93■■□□□ 1.1
COPS7A-218ENST00000543939 TC2NQ8N9U0 490 aa21.93■■□□□ 1.1
COPS7A-218ENST00000543939 ARID2Q68CP9 1835 aa21.93■■□□□ 1.1
COPS7A-218ENST00000543939 B4DLN1 442 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 PSAPP07602 524 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 ZBTB48P10074 688 aaPredicted RBP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 PRKCSHP14314 528 aaPredicted RBP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 ACTR2P61160 394 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 GOLGA8FQ08AF8 430 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 GOLGA8DPQ0D2H9 430 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 KNOP1Q1ED39 458 aaKnown RBP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 EDRF1Q3B7T1 1238 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 MIIPQ5JXC2 388 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 CST9Q5W186 159 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 SEPT14Q6ZU15 432 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 DAW1Q8N136 415 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 CEP63Q96MT8 703 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 FIZ1Q96SL8 496 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 TELO2Q9Y4R8 837 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 A0A1W2PQC6 194 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 EIF3DO15371 548 aaKnown RBP eCLIP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 HIP1RO75146 1068 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 PRPF6O94906 941 aaKnown RBP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 ITGBL1O95965 494 aaPredicted RBP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 PGK2P07205 417 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 DNM2P50570 870 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 ABHD15Q6UXT9 468 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 CCDC112Q8NEF3 446 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 GPRC5AQ8NFJ5 357 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 SMCR8Q8TEV9 937 aaPredicted RBP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 PORCNQ9H237 461 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 GABBR1Q9UBS5 961 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 TRAF3IP3Q9Y228 551 aa21.92■■□□□ 1.1
COPS7A-218ENST00000543939 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.92■■□□□ 1.1
COPS7A-218ENST00000543939 SOCS7O14512 581 aa21.91■■□□□ 1.1
COPS7A-218ENST00000543939 NKRFO15226 690 aaKnown RBP eCLIP21.91■■□□□ 1.1
COPS7A-218ENST00000543939 GCNT3O95395 438 aa21.91■■□□□ 1.1
COPS7A-218ENST00000543939 TPM2P07951 284 aa21.91■■□□□ 1.1
COPS7A-218ENST00000543939 CEP135Q66GS9 1140 aa21.91■■□□□ 1.1
COPS7A-218ENST00000543939 ATP6V0A1Q93050 837 aa21.91■■□□□ 1.1
COPS7A-218ENST00000543939 MCM3APO60318 1980 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 TMEM150BA6NC51 233 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 BACH1O14867 736 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 NRDCO43847 1150 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 ZNF862O60290 1169 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 DKC1O60832 514 aaKnown RBP eCLIP21.9■■□□□ 1.1
COPS7A-218ENST00000543939 STBD1O95210 358 aa21.9■■□□□ 1.1
COPS7A-218ENST00000543939 NMT1P30419 496 aaKnown RBP21.9■■□□□ 1.1
COPS7A-218ENST00000543939 ADKP55263 362 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms