RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 STBD1O95210 358 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 OATP04181 439 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
CD9-210ENST00000543916 IGBP1P78318 339 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 CYP4A11Q02928 519 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
CD9-210ENST00000543916 TMEM266Q2M3C6 531 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 SERINC5Q86VE9 423 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
CD9-210ENST00000543916 PPP1R12CQ9BZL4 782 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 HIPK3Q9H422 1215 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 ZDHHC9Q9Y397 364 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 SIP14410 1827 aa16.95■□□□□ 0.3
CD9-210ENST00000543916 COL1A2P08123 1366 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 MBLAC1A4D2B0 266 aaPredicted RBP16.94■□□□□ 0.3
CD9-210ENST00000543916 TMEM150BA6NC51 233 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 P4HBP07237 508 aaKnown RBP16.94■□□□□ 0.3
CD9-210ENST00000543916 GNAT1P11488 350 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 RAG1P15918 1043 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 CYP2C18P33260 490 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 QARSP47897 775 aaKnown RBP16.94■□□□□ 0.3
CD9-210ENST00000543916 PSMC5P62195 406 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 PTK7Q13308 1070 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 CTTNQ14247 550 aaKnown RBP16.94■□□□□ 0.3
CD9-210ENST00000543916 TRIM71Q2Q1W2 868 aaKnown RBP16.94■□□□□ 0.3
CD9-210ENST00000543916 RUFY4Q6ZNE9 571 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 IGSF22Q8N9C0 903 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 FAM167AQ96KS9 214 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 HSD17B14Q9BPX1 270 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 LXNQ9BS40 222 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 TUBE1Q9UJT0 475 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 SCN5AQ14524 2016 aa16.94■□□□□ 0.3
CD9-210ENST00000543916 PDE4DIPQ5VU43 2346 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 RRN3P2A6NIE6 340 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 SLITRK3O94933 977 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 BRD1O95696 1058 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 TIMP1P01033 207 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 PTPAQ15257 358 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 ZNF484Q5JVG2 852 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 DTHD1Q6ZMT9 781 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 NEK9Q8TD19 979 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 BADQ92934 168 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 TNPO1Q92973 898 aaKnown RBP16.93■□□□□ 0.3
CD9-210ENST00000543916 USP28Q96RU2 1077 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 WNT8AQ9H1J5 351 aa16.93■□□□□ 0.3
CD9-210ENST00000543916 PP2D1A8MPX8 630 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 MED24O75448 989 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 BMP15O95972 392 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 SPATA31C1P0DKV0 1188 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 DDIT3P35638 169 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 MAGEA10P43363 369 aaPredicted RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 CEBPZQ03701 1054 aaKnown RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 RBL2Q08999 1139 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 PDIA5Q14554 519 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 FOXD4L6Q3SYB3 417 aaPredicted RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 XKR3Q5GH77 459 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 ARL6IP4Q66PJ3 421 aaKnown RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 PLA2G4FQ68DD2 849 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 FOXD4L3Q6VB84 417 aaPredicted RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 ANO5Q75V66 913 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 TPH2Q8IWU9 490 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 C4orf19Q8IY42 314 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 SH2D3AQ9BRG2 576 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 NRBP2Q9NSY0 501 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 LRWD1Q9UFC0 647 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 SEPT9Q9UHD8 586 aaPredicted RBP16.92■□□□□ 0.3
CD9-210ENST00000543916 CEP131Q9UPN4 1083 aa16.92■□□□□ 0.3
CD9-210ENST00000543916 VWA3AA6NCI4 1184 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 ZBTB39O15060 712 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 DKC1O60832 514 aaKnown RBP eCLIP16.91■□□□□ 0.3
CD9-210ENST00000543916 C22orf31O95567 290 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 CKBP12277 381 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 KLRC1P26715 233 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 CCL23P55773 120 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 GRIN1Q05586 938 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 TARBP2Q15633 366 aaKnown RBP16.91■□□□□ 0.3
CD9-210ENST00000543916 MTHFD1LQ6UB35 978 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 CCDC155Q8N6L0 562 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 CAGE1Q8TC20 777 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 NIFKQ9BYG3 293 aaKnown RBP16.91■□□□□ 0.3
CD9-210ENST00000543916 ZSWIM4Q9H7M6 989 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 EVPLQ92817 2033 aa16.91■□□□□ 0.3
CD9-210ENST00000543916 LYPLA2O95372 231 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 CDC25AP30304 524 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 NASPP49321 788 aaPredicted RBP16.9■□□□□ 0.3
CD9-210ENST00000543916 BFSP2Q13515 415 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 MTERF2Q49AM1 385 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 MFSD5Q6N075 450 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 TRAF7Q6Q0C0 670 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 CATSPER3Q86XQ3 398 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
CD9-210ENST00000543916 ERMNQ8TAM6 284 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 SCLYQ96I15 445 aa16.9■□□□□ 0.3
CD9-210ENST00000543916 ZNF396Q96N95 335 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms