RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 CYP3A7P24462 503 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 NONOQ15233 471 aaKnown RBP eCLIP16.17■□□□□ 0.18
VPS37B-204ENST00000543590 Q4G0T1 1027 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 FAM117BQ6P1L5 589 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 KRT25Q7Z3Z0 450 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 SLC5A5Q92911 643 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
VPS37B-204ENST00000543590 GJB4Q9NTQ9 266 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 PCDHA10Q9Y5I2 948 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 MAFBQ9Y5Q3 323 aaPredicted RBP16.17■□□□□ 0.18
VPS37B-204ENST00000543590 CDY2AQ9Y6F7 541 aa16.17■□□□□ 0.18
VPS37B-204ENST00000543590 LCHNA4D1U4 455 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 TDP2O95551 362 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 RPLP2P05387 115 aaKnown RBP16.16■□□□□ 0.18
VPS37B-204ENST00000543590 GHRP10912 638 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 IGFBP4P22692 258 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 KLRC1P26715 233 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 MRPS6P82932 125 aaKnown RBP16.16■□□□□ 0.18
VPS37B-204ENST00000543590 LPIN1Q14693 890 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 MTHFD1LQ6UB35 978 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 APBB2Q92870 758 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 GTF3C6Q969F1 213 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 RAD9AQ99638 391 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 CERS4Q9HA82 394 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 MICAL3Q7RTP6 2002 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 SMIM35A0A1B0GVV1 85 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 WDR64B1ANS9 1081 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 GAS7O60861 476 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 FDPSP14324 419 aaKnown RBP16.16■□□□□ 0.18
VPS37B-204ENST00000543590 INF2Q27J81 1249 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 C8orf34Q49A92 452 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 ZNF484Q5JVG2 852 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 FBXO47Q5MNV8 452 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 LRCH2Q5VUJ6 765 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 IER5Q5VY09 327 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 MOXD1Q6UVY6 613 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
VPS37B-204ENST00000543590 CKAP2LQ8IYA6 745 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 MYOCDQ8IZQ8 938 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 WASF1Q92558 559 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 GJA10Q969M2 543 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 MBOAT7Q96N66 472 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 TEKT3Q9BXF9 490 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 DISC1Q9NRI5 854 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 GABBR1Q9UBS5 961 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 SAMM50Q9Y512 469 aa16.16■□□□□ 0.18
VPS37B-204ENST00000543590 COL1A2P08123 1366 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.15■□□□□ 0.18
VPS37B-204ENST00000543590 ZBTB42B2RXF5 422 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 PSMD10O75832 226 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 USP38Q8NB14 1042 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 BBXQ8WY36 941 aaPredicted RBP16.15■□□□□ 0.18
VPS37B-204ENST00000543590 ARNTL2Q8WYA1 636 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 CHD9Q3L8U1 2897 aa16.15■□□□□ 0.18
VPS37B-204ENST00000543590 SIP14410 1827 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 M0QZ92 97 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 RFXAPO00287 272 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 CHMP2AO43633 222 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 SFNP31947 248 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 TMEM62Q0P6H9 643 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 TRMT1LQ7Z2T5 733 aaKnown RBP16.14■□□□□ 0.17
VPS37B-204ENST00000543590 SPRED2Q7Z698 418 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 NME8Q8N427 588 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 NSUN7Q8NE18 718 aaKnown RBP16.14■□□□□ 0.17
VPS37B-204ENST00000543590 TOP1MTQ969P6 601 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 CELF4Q9BZC1 486 aaKnown RBP16.14■□□□□ 0.17
VPS37B-204ENST00000543590 UNC45AQ9H3U1 944 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 DDX25Q9UHL0 483 aaKnown RBP16.14■□□□□ 0.17
VPS37B-204ENST00000543590 INSL6Q9Y581 213 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 TRPV2Q9Y5S1 764 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 IGSF9BQ9UPX0 1349 aa16.14■□□□□ 0.17
VPS37B-204ENST00000543590 MYH9P35579 1960 aaKnown RBP16.13■□□□□ 0.17
VPS37B-204ENST00000543590 JAK3P52333 1124 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 HTRA4P83105 476 aaPredicted RBP16.13■□□□□ 0.17
VPS37B-204ENST00000543590 TSHZ1Q6ZSZ6 1077 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 PIK3AP1Q6ZUJ8 805 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 KIAA0319LQ8IZA0 1049 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 ETNPPLQ8TBG4 499 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 PPM1EQ8WY54 764 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 FAM167AQ96KS9 214 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 AGO3Q9H9G7 860 aaKnown RBP16.13■□□□□ 0.17
VPS37B-204ENST00000543590 SQORQ9Y6N5 450 aa16.13■□□□□ 0.17
VPS37B-204ENST00000543590 LINC01553A4QN01 128 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 SLC37A4O43826 429 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 ZNF862O60290 1169 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 JAK2O60674 1132 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 UPP2O95045 317 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 C22orf31O95567 290 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 CD52P31358 61 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 ST3GAL1Q11201 340 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 CCDC85BQ15834 202 aaPredicted RBP16.12■□□□□ 0.17
VPS37B-204ENST00000543590 B3GNT9Q6UX72 402 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 NEK8Q86SG6 692 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 LIMCH1Q9UPQ0 1083 aa16.12■□□□□ 0.17
VPS37B-204ENST00000543590 KDM3AQ9Y4C1 1321 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms