RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 ZNF579Q8NAF0 562 aaKnown RBP23.31■■□□□ 1.32
OTUB1-211ENST00000543004 TRIP12Q14669 1992 aaPredicted RBP23.31■■□□□ 1.32
OTUB1-211ENST00000543004 A0A087X0B3 334 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 CCDC85CA6NKD9 419 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 HAUS3Q68CZ6 603 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 KCNK18Q7Z418 384 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 PIGOQ8TEQ8 1089 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 ATP6V0A1Q93050 837 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 VTI1AQ96AJ9 217 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 PAWRQ96IZ0 340 aaKnown RBP23.3■■□□□ 1.32
OTUB1-211ENST00000543004 SENP6Q9GZR1 1112 aaPredicted RBP23.3■■□□□ 1.32
OTUB1-211ENST00000543004 TUFT1Q9NNX1 390 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 ZNF215Q9UL58 517 aaPredicted RBP23.3■■□□□ 1.32
OTUB1-211ENST00000543004 KIAA1024Q9UPX6 916 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 KAT6AQ92794 2004 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 ARID2Q68CP9 1835 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 NBPF20Q3BBV1 942 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 RESP18Q5W5W9 173 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 NEK9Q8TD19 979 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 GLT1D1Q96MS3 346 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 ZSWIM4Q9H7M6 989 aa23.3■■□□□ 1.32
OTUB1-211ENST00000543004 DDX19AQ9NUU7 478 aaKnown RBP23.3■■□□□ 1.32
OTUB1-211ENST00000543004 A0A1B0GVL5 298 aa23.29■■□□□ 1.32
OTUB1-211ENST00000543004 HIC1Q14526 733 aa23.29■■□□□ 1.32
OTUB1-211ENST00000543004 PLA2G4FQ68DD2 849 aa23.29■■□□□ 1.32
OTUB1-211ENST00000543004 ANO5Q75V66 913 aa23.29■■□□□ 1.32
OTUB1-211ENST00000543004 PDILTQ8N807 584 aa23.29■■□□□ 1.32
OTUB1-211ENST00000543004 CCSER1Q9C0I3 900 aa23.29■■□□□ 1.32
OTUB1-211ENST00000543004 TRPC6Q9Y210 931 aa23.29■■□□□ 1.32
OTUB1-211ENST00000543004 E9PMD0 336 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 PRPF40AO75400 957 aaKnown RBP23.28■■□□□ 1.32
OTUB1-211ENST00000543004 OATP04181 439 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 COL6A1P12109 1028 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 C4orf19Q8IY42 314 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 ANKLE1Q8NAG6 615 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 TMEM87AQ8NBN3 555 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 TRAPPC12Q8WVT3 735 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 ZBTB10Q96DT7 871 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 GOLPH3LQ9H4A5 285 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 STARD7Q9NQZ5 370 aa23.28■■□□□ 1.32
OTUB1-211ENST00000543004 SEPT9Q9UHD8 586 aaPredicted RBP23.28■■□□□ 1.32
OTUB1-211ENST00000543004 DDX11L8A8MPP1 907 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 PLCG1P19174 1290 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 ATN1P54259 1190 aaPredicted RBP23.27■■□□□ 1.32
OTUB1-211ENST00000543004 NPEPPSP55786 919 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 ITGA7Q13683 1181 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 HYIQ5T013 277 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 ATP8B4Q8TF62 1192 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 GBP4Q96PP9 640 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 KATNAL1Q9BW62 490 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 HDAC6Q9UBN7 1215 aa23.27■■□□□ 1.32
OTUB1-211ENST00000543004 CABYRO75952 493 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 SMIM10L2AP0DMW4 78 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 SMIM10L2BP0DMW5 78 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 INSRRP14616 1297 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 CMA1P23946 247 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 YWHABP31946 246 aaKnown RBP23.26■■□□□ 1.31
OTUB1-211ENST00000543004 SLC26A2P50443 739 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 TMEM119Q4V9L6 283 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 RASSF8Q8NHQ8 419 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 SETD4Q9NVD3 440 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 ZBTB42B2RXF5 422 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 LYPLA2O95372 231 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 PFKFB1P16118 471 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 IGBP1P78318 339 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 ZNF200P98182 395 aaPredicted RBP23.26■■□□□ 1.31
OTUB1-211ENST00000543004 XKR3Q5GH77 459 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 FAM47CQ5HY64 1035 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 FSIP1Q8NA03 581 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 BBXQ8WY36 941 aaPredicted RBP23.26■■□□□ 1.31
OTUB1-211ENST00000543004 CALML4Q96GE6 196 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 CDK5RAP3Q96JB5 506 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 STK24Q9Y6E0 443 aa23.26■■□□□ 1.31
OTUB1-211ENST00000543004 KDM3AQ9Y4C1 1321 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 EVPLQ92817 2033 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 A0A1W2PQ27 194 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 A0A1W2PQ64 194 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 A0A1W2PQD8 194 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 NDUFA8P51970 172 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 MTERF2Q49AM1 385 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 C7orf31Q8N865 590 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 C11orf49Q9H6J7 331 aa23.25■■□□□ 1.31
OTUB1-211ENST00000543004 GOLGA6L4A6NEF3 574 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 TXLNAP40222 546 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 PPFIA1Q13136 1202 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 CSPP1Q1MSJ5 1256 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 NAALADL2Q58DX5 795 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 UBE2Q1Q7Z7E8 422 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 NACC1Q96RE7 527 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 NRBP2Q9NSY0 501 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 BLOC1S4Q9NUP1 217 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 FAM13BQ9NYF5 915 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 HPSEQ9Y251 543 aa23.24■■□□□ 1.31
OTUB1-211ENST00000543004 LOXHD1Q8IVV2 1947 aa23.23■■□□□ 1.31
OTUB1-211ENST00000543004 POLR2DO15514 142 aaKnown RBP23.23■■□□□ 1.31
OTUB1-211ENST00000543004 HBP1O60381 514 aa23.23■■□□□ 1.31
OTUB1-211ENST00000543004 DKC1O60832 514 aaKnown RBP eCLIP23.23■■□□□ 1.31
OTUB1-211ENST00000543004 GRIK4Q16099 956 aa23.23■■□□□ 1.31
OTUB1-211ENST00000543004 GDF6Q6KF10 455 aaPredicted RBP23.23■■□□□ 1.31
OTUB1-211ENST00000543004 LMBR1Q8WVP7 490 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms