RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ZNF200P98182 395 aaPredicted RBP19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 SH3RF1Q7Z6J0 888 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 ERMNQ8TAM6 284 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 CTAGE1Q96RT6 745 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 NRBP2Q9NSY0 501 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 LRWD1Q9UFC0 647 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 TBX21Q9UL17 535 aa19.2■□□□□ 0.66
RABGGTA-203ENST00000543002 KIAA0355O15063 1070 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 STBD1O95210 358 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 CYP2C9P11712 490 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 NASPP49321 788 aaPredicted RBP19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 NUCB2P80303 420 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 CYP4A11Q02928 519 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 CEBPZQ03701 1054 aaKnown RBP19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 XKR3Q5GH77 459 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 ZNF484Q5JVG2 852 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 ATL3Q6DD88 541 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 TRMT1LQ7Z2T5 733 aaKnown RBP19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 C4orf19Q8IY42 314 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 LXNQ9BS40 222 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 ZSWIM4Q9H7M6 989 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 PRDM5Q9NQX1 630 aaPredicted RBP19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 WRAP73Q9P2S5 460 aaPredicted RBP19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 TFIP11Q9UBB9 837 aaKnown RBP19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 PRKAG2Q9UGJ0 569 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 STK24Q9Y6E0 443 aa19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
RABGGTA-203ENST00000543002 TNRC18O15417 2968 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 COL1A2P08123 1366 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 MBLAC1A4D2B0 266 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 VWA3AA6NCI4 1184 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 TRIM43BA6NCK2 446 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 TREHO43280 583 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 LYPLA2O95372 231 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 IGBP1P78318 339 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 PTK7Q13308 1070 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 CTTNQ14247 550 aaKnown RBP19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 SLC39A14Q15043 492 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 MARCH8Q5T0T0 291 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 SERINC5Q86VE9 423 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 TPH2Q8IWU9 490 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 TRIM43Q96BQ3 446 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 POLR3CQ9BUI4 534 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 NIFKQ9BYG3 293 aaKnown RBP19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 TUFT1Q9NNX1 390 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 KAT6AQ92794 2004 aa19.18■□□□□ 0.66
RABGGTA-203ENST00000543002 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 ZBTB42B2RXF5 422 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 SPATA31C1P0DKV0 1188 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 RPA1P27694 616 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 FOXD4L6Q3SYB3 417 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 HAUS3Q68CZ6 603 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 FOXD4L3Q6VB84 417 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 CATSPER3Q86XQ3 398 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 LINC00301Q8NCQ3 95 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 TRAPPC12Q8WVT3 735 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 NOC4LQ9BVI4 516 aaKnown RBP19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 TUBE1Q9UJT0 475 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 ZMYND8Q9ULU4 1186 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 PDE4DIPQ5VU43 2346 aa19.17■□□□□ 0.66
RABGGTA-203ENST00000543002 TRIP12Q14669 1992 aaPredicted RBP19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 DDX11L8A8MPP1 907 aa19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 MED24O75448 989 aa19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 YEATS4O95619 227 aa19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 SYN1P17600 705 aa19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 TARBP2Q15633 366 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 ANO5Q75V66 913 aa19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 DHX38Q92620 1227 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 HIPK3Q9H422 1215 aa19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 SEPT9Q9UHD8 586 aaPredicted RBP19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 ATP6V1DQ9Y5K8 247 aa19.16■□□□□ 0.66
RABGGTA-203ENST00000543002 PP2D1A8MPX8 630 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 RAG1P15918 1043 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 MUTP22033 750 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 KLRC1P26715 233 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 MARCKSP29966 332 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 YWHABP31946 246 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 LONP1P36776 959 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 DNM1Q05193 864 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 RBL2Q08999 1139 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 BFSP2Q13515 415 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 STK38Q15208 465 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 TRIM71Q2Q1W2 868 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 KRT79Q5XKE5 535 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 TAF2Q6P1X5 1199 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 MTHFD1LQ6UB35 978 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 CCDC155Q8N6L0 562 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 CAGE1Q8TC20 777 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 WNT8BQ93098 351 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 AK8Q96MA6 479 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 CIZ1Q9ULV3 898 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 SRPRBQ9Y5M8 271 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-203ENST00000543002 TMEM150BA6NC51 233 aa19.14■□□□□ 0.65
RABGGTA-203ENST00000543002 H0YGN5 161 aa19.14■□□□□ 0.65
RABGGTA-203ENST00000543002 PITPNM1O00562 1244 aa19.14■□□□□ 0.65
RABGGTA-203ENST00000543002 TIMP1P01033 207 aa19.14■□□□□ 0.65
RABGGTA-203ENST00000543002 ITGB8P26012 769 aa19.14■□□□□ 0.65
RABGGTA-203ENST00000543002 CDC25AP30304 524 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms