RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-210	ENST00000542817	ARRDC4	Q8NCT1	418 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	ENGASE	Q8NFI3	743 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	NEK9	Q8TD19	979 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	SNX29	Q8TEQ0	813 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	MTR	Q99707	1265 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	MTG1	Q9BT17	334 aa	Predicted RBP	11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	SMARCAD1	Q9H4L7	1026 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	SPC25	Q9HBM1	224 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817	LMBRD1	Q9NUN5	540 aa		11.97	□□□□□ -0.49
NPIPB3-210	ENST00000542817		A0A1B0GVL5	298 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	RBAK-RBAKDN	I3L0D1	243 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	BACH1	O14867	736 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	KPNA6	O60684	536 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	TFRC	P02786	760 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	MARK3	P27448	753 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	CCT6A	P40227	531 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	PSEN2	P49810	448 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	CDK7	P50613	346 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	NDUFA8	P51970	172 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	SNW1	Q13573	536 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	MFSD10	Q14728	455 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	KIAA0753	Q2KHM9	967 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	NBPF20	Q3BBV1	942 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	TPH2	Q8IWU9	490 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	ANKLE1	Q8NAG6	615 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	ATP8B4	Q8TF62	1192 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	ZBTB10	Q96DT7	871 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	SH2D3A	Q9BRG2	576 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	NIFK	Q9BYG3	293 aa	Known RBP	11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	ZSWIM4	Q9H7M6	989 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817	KIAA1024	Q9UPX6	916 aa		11.96	□□□□□ -0.49
NPIPB3-210	ENST00000542817		E9PMD0	336 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SLC26A4	O43511	780 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	OAT	P04181	439 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PFKFB1	P16118	471 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PLCG1	P19174	1290 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	MUT	P22033	750 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	UBA7	P41226	1012 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SLC26A2	P50443	739 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	NPEPPS	P55786	919 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	BRDT	Q58F21	947 aa	Predicted RBP	11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	FAM160B1	Q5W0V3	765 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	KRT79	Q5XKE5	535 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PLA2G4F	Q68DD2	849 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SESTD1	Q86VW0	696 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PIGO	Q8TEQ8	1089 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	GLG1	Q92896	1179 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PLIN2	Q99541	437 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	TMEM106C	Q9BVX2	250 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PANK2	Q9BZ23	570 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	RAB34	Q9BZG1	259 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PDLIM7	Q9NR12	457 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	DDX19A	Q9NUU7	478 aa	Known RBP	11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ERAP1	Q9NZ08	941 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	HDAC6	Q9UBN7	1215 aa		11.95	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ZEB2	O60315	1214 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PRPF40A	O75400	957 aa	Known RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	CABYR	O75952	493 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	MYCN	P04198	464 aa	Predicted RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SMIM10L2A	P0DMW4	78 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SMIM10L2B	P0DMW5	78 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	XRCC6	P12956	609 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	INSRR	P14616	1297 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	LIG1	P18858	919 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	YWHAB	P31946	246 aa	Known RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	RARRES1	P49788	294 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ZNF200	P98182	395 aa	Predicted RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	MKRN4P	Q13434	485 aa	Predicted RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ITGA7	Q13683	1181 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SNX17	Q15036	470 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	XKR3	Q5GH77	459 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	HAUS3	Q68CZ6	603 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	GDF6	Q6KF10	455 aa	Predicted RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	LINC01465	Q8N7H1	131 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	FSIP1	Q8NA03	581 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	LMBR1	Q8WVP7	490 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	TRAPPC12	Q8WVT3	735 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	BBX	Q8WY36	941 aa	Predicted RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ATP6V0A1	Q93050	837 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	PAWR	Q96IZ0	340 aa	Known RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	AZI2	Q9H6S1	392 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	KCNH3	Q9ULD8	1083 aa		11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	MYH9	P35579	1960 aa	Known RBP	11.94	□□□□□ -0.5
NPIPB3-210	ENST00000542817	IGKV6-21	A0A0C4DH24	114 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	DDX11L8	A8MPP1	907 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ACTN4	O43707	911 aa	Known RBP	11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	C22orf31	O95567	290 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SLC12A3	P55017	1021 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	LONRF3	Q496Y0	759 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ARSH	Q5FYA8	562 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	NFRKB	Q6P4R8	1299 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	ERMN	Q8TAM6	284 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	MRPS27	Q92552	414 aa	Known RBP	11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	WNT8B	Q93098	351 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	NACC1	Q96RE7	527 aa		11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.93	□□□□□ -0.5
NPIPB3-210	ENST00000542817	XPNPEP1	Q9NQW7	623 aa		11.93	□□□□□ -0.5

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