RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 KIAA2012Q0VF49 1180 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 DBPQ10586 325 aaPredicted RBP4.53□□□□□ -1.68
USP28-210ENST00000542033 NT5DC1Q5TFE4 455 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 FRMD5Q7Z6J6 570 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 ANKRD13AQ8IZ07 590 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 ADGRG2Q8IZP9 1017 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 NXPE1Q8N323 547 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 HIPK4Q8NE63 616 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 FEZF2Q8TBJ5 459 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 ZSWIM3Q96MP5 696 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 TEPSINQ96N21 525 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 ORAI3Q9BRQ5 295 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 MTFR1LQ9H019 292 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 XYLT2Q9H1B5 865 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 CAAP1Q9H8G2 361 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 RTEL1Q9NZ71 1219 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 RBPJLQ9UBG7 517 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 CROTQ9UKG9 612 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.53□□□□□ -1.68
USP28-210ENST00000542033 B3GALT1Q9Y5Z6 326 aa4.53□□□□□ -1.68
USP28-210ENST00000542033 FAM83GA6ND36 823 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 OTOL1A6NHN0 477 aaPredicted RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 C9orf118A6NHY6 69 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 ZNF839A8K0R7 811 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 ZNF891A8MT65 544 aaPredicted RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 CYP1A1P04798 512 aaPredicted RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 CHGBP05060 677 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 ZBTB48P10074 688 aaPredicted RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 ZNF28P17035 718 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 STAT3P40763 770 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 IL2P60568 153 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 OCRLQ01968 901 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 NFIXQ14938 502 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 SEC23AQ15436 765 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 SKIDA1Q1XH10 827 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 PRR31Q5SQ13 230 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 FSTL4Q6MZW2 842 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 CC2D1AQ6P1N0 951 aaPredicted RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 BORAQ6PGQ7 559 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 DDX46Q7L014 1031 aaKnown RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 ZNF761Q86XN6 746 aaPredicted RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 THNSL2Q86YJ6 484 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 PASD1Q8IV76 773 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 KIAA1958Q8N8K9 716 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 DTX3Q8N9I9 347 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 SYT8Q8NBV8 401 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 WDR48Q8TAF3 677 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 IGDCC4Q8TDY8 1250 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 DLG3Q92796 817 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 USP7Q93009 1102 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 GBP4Q96PP9 640 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 SLC39A2Q9NP94 309 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 ACSS2Q9NR19 701 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 THG1LQ9NWX6 298 aaKnown RBP4.52□□□□□ -1.69
USP28-210ENST00000542033 ARHGAP20Q9P2F6 1191 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 FTSJ1Q9UET6 329 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 SBNO2Q9Y2G9 1366 aa4.52□□□□□ -1.69
USP28-210ENST00000542033 DDX3XO00571 662 aaKnown RBP eCLIP4.51□□□□□ -1.691e-9■■■■□ 20
USP28-210ENST00000542033 NOBOXO60393 691 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 DNAJC6O75061 913 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 CYP17A1P05093 508 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 MMEP08473 750 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 ATP2A2P16615 1042 aaKnown RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 CPEP16870 476 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 PTGS1P23219 599 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 AOAHP28039 575 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 SDHAP31040 664 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 IL13P35225 146 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 GLRBP48167 497 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 KPNA1P52294 538 aaPredicted RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 DSG1Q02413 1049 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 SMAD2Q15796 467 aaKnown RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 SEPT7Q16181 437 aaKnown RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 SKOR2Q2VWA4 1001 aaPredicted RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 RGL3Q3MIN7 710 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 TRMT10BQ6PF06 316 aaKnown RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 LILRA6Q6PI73 481 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 DPP8Q6V1X1 898 aaPredicted RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 RNF180Q86T96 592 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 C11orf74Q86VG3 221 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 PROSER1Q86XN7 944 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 ZDHHC14Q8IZN3 488 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 UBR7Q8N806 425 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 ASB15Q8WXK1 588 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 ERCC4Q92889 916 aaPredicted RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 LCORQ96JN0 433 aaPredicted RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 GPR101Q96P66 508 aaPredicted RBP4.51□□□□□ -1.69
USP28-210ENST00000542033 TMEM168Q9H0V1 697 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 SPC25Q9HBM1 224 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 OXSMQ9NWU1 459 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 ZFP69BQ9UJL9 534 aa4.51□□□□□ -1.69
USP28-210ENST00000542033 MROH6A6NGR9 719 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 SLC9A1P19634 815 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 FNTBP49356 437 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 STRN3Q13033 797 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 DHCR24Q15392 516 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 PHF19Q5T6S3 580 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 MCTP2Q6DN12 878 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
USP28-210ENST00000542033 KRT26Q7Z3Y9 468 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms