RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 ITGB5P18084 799 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 SLC26A2P50443 739 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 CAMK1Q14012 370 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 MARCH8Q5T0T0 291 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 TTC22Q5TAA0 569 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
SNHG1-216ENST00000541416 TEX2Q8IWB9 1127 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 CDCA3Q99618 268 aaPredicted RBP14.03□□□□□ -0.16
SNHG1-216ENST00000541416 CELF4Q9BZC1 486 aaKnown RBP14.03□□□□□ -0.16
SNHG1-216ENST00000541416 IL25Q9H293 177 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 AGO3Q9H9G7 860 aaKnown RBP14.03□□□□□ -0.16
SNHG1-216ENST00000541416 PKD2L1Q9P0L9 805 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 TELO2Q9Y4R8 837 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 PCDHB7Q9Y5E2 793 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 UBIAD1Q9Y5Z9 338 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 IGSF9BQ9UPX0 1349 aa14.03□□□□□ -0.16
SNHG1-216ENST00000541416 ZNF318Q5VUA4 2279 aa14.02□□□□□ -0.16
SNHG1-216ENST00000541416 KDM3AQ9Y4C1 1321 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 SMIM35A0A1B0GVV1 85 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 LOC730098B7Z3J9 87 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 KRT76Q01546 638 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 PTH1RQ03431 593 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 PLPPR4Q7Z2D5 763 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 RBM23Q86U06 439 aaKnown RBP14.02□□□□□ -0.17
SNHG1-216ENST00000541416 LINC01599Q8WXQ3 324 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 TMEM87BQ96K49 555 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 PHF7Q9BWX1 381 aaPredicted RBP14.02□□□□□ -0.17
SNHG1-216ENST00000541416 LY9Q9HBG7 655 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 TLR9Q9NR96 1032 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 C1orf112Q9NSG2 853 aa14.02□□□□□ -0.17
SNHG1-216ENST00000541416 DENND3A2RUS2 1198 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 ATF7P17544 494 aaPredicted RBP14.01□□□□□ -0.17
SNHG1-216ENST00000541416 MCM5P33992 734 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 SARSP49591 514 aaKnown RBP14.01□□□□□ -0.17
SNHG1-216ENST00000541416 STAT5BP51692 787 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 ZXDAP98168 799 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 TMEM62Q0P6H9 643 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 NFX1Q12986 1120 aaKnown RBP14.01□□□□□ -0.17
SNHG1-216ENST00000541416 CBX2Q14781 532 aaPredicted RBP14.01□□□□□ -0.17
SNHG1-216ENST00000541416 ADGRD2Q7Z7M1 963 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 MB21D2Q8IYB1 491 aaPredicted RBP14.01□□□□□ -0.17
SNHG1-216ENST00000541416 CRIPAKQ8N1N5 446 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 FBXL6Q8N531 539 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 CLEC1BQ9P126 229 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 PCDHA6Q9UN73 950 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 USP15Q9Y4E8 981 aaPredicted RBP14.01□□□□□ -0.17
SNHG1-216ENST00000541416 PCDHA8Q9Y5H6 950 aa14.01□□□□□ -0.17
SNHG1-216ENST00000541416 NFASCO94856 1347 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 KIAA1671Q9BY89 1806 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 GPR182O15218 404 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 PRC1O43663 620 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 ST18O60284 1047 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 PPFIA3O75145 1194 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 RPS6KA5O75582 802 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 IBSPP21815 317 aaPredicted RBP14□□□□□ -0.17
SNHG1-216ENST00000541416 DNAJB1P25685 340 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 CHMLP26374 656 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 ANTXR2P58335 489 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 ACTR2P61160 394 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 SYNE3Q6ZMZ3 975 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 HEATR3Q7Z4Q2 680 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
SNHG1-216ENST00000541416 SRBD1Q8N5C6 995 aaKnown RBP14□□□□□ -0.17
SNHG1-216ENST00000541416 MAP4K1Q92918 833 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 MXRA8Q9BRK3 442 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 MYL10Q9BUA6 226 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 KCNH7Q9NS40 1196 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 PUF60Q9UHX1 559 aaKnown RBP14□□□□□ -0.17
SNHG1-216ENST00000541416 BARX2Q9UMQ3 279 aaPredicted RBP14□□□□□ -0.17
SNHG1-216ENST00000541416 SLC12A7Q9Y666 1083 aa14□□□□□ -0.17
SNHG1-216ENST00000541416 USP34Q70CQ2 3546 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 SGSM2O43147 1006 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 PLEKHA8P1O95397 391 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 FOSP01100 380 aaPredicted RBP13.99□□□□□ -0.17
SNHG1-216ENST00000541416 GSPT1P15170 499 aaKnown RBP13.99□□□□□ -0.17
SNHG1-216ENST00000541416 LIFRP42702 1097 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 SIGLEC14Q08ET2 396 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 PLCB4Q15147 1175 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 UBE2SQ16763 222 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 FAM160B1Q5W0V3 765 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 SLC24A5Q71RS6 500 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 ZBTB33Q86T24 672 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 THNSL1Q8IYQ7 743 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 RPGRIP1Q96KN7 1286 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 GINS2Q9Y248 185 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 TECTAO75443 2155 aa13.99□□□□□ -0.17
SNHG1-216ENST00000541416 LOXHD1Q8IVV2 1947 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 TBKBP1A7MCY6 615 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 BACH1O14867 736 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 HOXA2O43364 376 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 HBP1O60381 514 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 FGF18O76093 207 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 GLP2RO95838 553 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 LAG3P18627 525 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 KLRC1P26715 233 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 DUSP6Q16828 381 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 CEP55Q53EZ4 464 aa13.98□□□□□ -0.17
SNHG1-216ENST00000541416 PRSS33Q8NF86 280 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms