RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-223ENST00000541167 TRAPPC12Q8WVT3 735 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 RANBP2P49792 3224 aaKnown RBP22.6■■□□□ 1.21
RAP1B-223ENST00000541167 TET1Q8NFU7 2136 aa22.6■■□□□ 1.21
RAP1B-223ENST00000541167 MBLAC1A4D2B0 266 aaPredicted RBP22.59■■□□□ 1.21
RAP1B-223ENST00000541167 U2AF2P26368 475 aaKnown RBP eCLIP22.59■■□□□ 1.213e-8■□□□□ 9.3
RAP1B-223ENST00000541167 UGCGQ16739 394 aa22.59■■□□□ 1.21
RAP1B-223ENST00000541167 MARCH8Q5T0T0 291 aa22.59■■□□□ 1.21
RAP1B-223ENST00000541167 LARP1BQ659C4 914 aaKnown RBP22.59■■□□□ 1.21
RAP1B-223ENST00000541167 TAF2Q6P1X5 1199 aa22.59■■□□□ 1.21
RAP1B-223ENST00000541167 RUFY4Q6ZNE9 571 aa22.59■■□□□ 1.21
RAP1B-223ENST00000541167 BBXQ8WY36 941 aaPredicted RBP22.59■■□□□ 1.21
RAP1B-223ENST00000541167 FAM167AQ96KS9 214 aa22.59■■□□□ 1.21
RAP1B-223ENST00000541167 COL1A2P08123 1366 aa22.59■■□□□ 1.21
RAP1B-223ENST00000541167 EVPLQ92817 2033 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 CAND2O75155 1236 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 PARNO95453 639 aaKnown RBP22.58■■□□□ 1.21
RAP1B-223ENST00000541167 FGBP02675 491 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 OATP04181 439 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 CTSHP09668 335 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 PRKCEQ02156 737 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 LRIT3Q3SXY7 679 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 ZNF484Q5JVG2 852 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 TTC38Q5R3I4 469 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 NCAPH2Q6IBW4 605 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 TRAF7Q6Q0C0 670 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 SNX21Q969T3 373 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 ZBTB10Q96DT7 871 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 FTOQ9C0B1 505 aaKnown RBP eCLIP22.58■■□□□ 1.21
RAP1B-223ENST00000541167 SIP14410 1827 aa22.58■■□□□ 1.21
RAP1B-223ENST00000541167 RSPH10B2B2RC85 870 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 EML1O00423 815 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 ZNF862O60290 1169 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 RSPH10BP0C881 870 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 TRAPPC10P48553 1259 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 ORC2Q13416 577 aaPredicted RBP22.57■■□□□ 1.2
RAP1B-223ENST00000541167 ZNF174Q15697 407 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 RSPH3Q86UC2 560 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 HSCBQ8IWL3 235 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 MTIF3Q9H2K0 278 aaKnown RBP22.57■■□□□ 1.2
RAP1B-223ENST00000541167 CEP131Q9UPN4 1083 aa22.57■■□□□ 1.2
RAP1B-223ENST00000541167 SOX1O00570 391 aaPredicted RBP22.56■■□□□ 1.2
RAP1B-223ENST00000541167 TXKP42681 527 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 MTHFD1LQ6UB35 978 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 OTOP2Q7RTS6 562 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 BANK1Q8NDB2 785 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 DNAJB3Q8WWF6 145 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 VWCEQ96DN2 955 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 FAM49AQ9H0Q0 323 aaPredicted RBP22.56■■□□□ 1.2
RAP1B-223ENST00000541167 TMEM60Q9H2L4 133 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 TTC12Q9H892 705 aaPredicted RBP22.56■■□□□ 1.2
RAP1B-223ENST00000541167 NRBP2Q9NSY0 501 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 FOXD4L1Q9NU39 408 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 PCDHA12Q9UN75 941 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 PCDHA2Q9Y5H9 948 aa22.56■■□□□ 1.2
RAP1B-223ENST00000541167 NBNO60934 754 aa22.55■■□□□ 1.2
RAP1B-223ENST00000541167 ACTN1P12814 892 aa22.55■■□□□ 1.2
RAP1B-223ENST00000541167 KLRC1P26715 233 aa22.55■■□□□ 1.2
RAP1B-223ENST00000541167 NBR1Q14596 966 aa22.55■■□□□ 1.2
RAP1B-223ENST00000541167 HERVK_113Q902F9 699 aa22.55■■□□□ 1.2
RAP1B-223ENST00000541167 INTS4Q96HW7 963 aaKnown RBP22.55■■□□□ 1.2
RAP1B-223ENST00000541167 MTMR9Q96QG7 549 aa22.55■■□□□ 1.2
RAP1B-223ENST00000541167 SEPT9Q9UHD8 586 aaPredicted RBP22.55■■□□□ 1.2
RAP1B-223ENST00000541167 LOXHD1Q8IVV2 1947 aa22.55■■□□□ 1.2
RAP1B-223ENST00000541167 ZBBXA8MT70 800 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 ZBTB42B2RXF5 422 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 OR52Z1P0C646 297 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 PSMC5P62195 406 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 SPIRE1Q08AE8 756 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 MBTPS1Q14703 1052 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 GPNMBQ14956 572 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 EPHA7Q15375 998 aa22.54■■□□□ 1.2
RAP1B-223ENST00000541167 VPS37CA5D8V6 355 aaPredicted RBP22.53■■□□□ 1.2
RAP1B-223ENST00000541167 CXCL10P02778 98 aa22.53■■□□□ 1.2
RAP1B-223ENST00000541167 RPLP2P05387 115 aaKnown RBP22.53■■□□□ 1.2
RAP1B-223ENST00000541167 PDCP20941 246 aa22.53■■□□□ 1.2
RAP1B-223ENST00000541167 QARSP47897 775 aaKnown RBP22.53■■□□□ 1.2
RAP1B-223ENST00000541167 XKR3Q5GH77 459 aa22.53■■□□□ 1.2
RAP1B-223ENST00000541167 RPAINQ86UA6 219 aa22.53■■□□□ 1.2
RAP1B-223ENST00000541167 LRCH3Q96II8 777 aa22.53■■□□□ 1.2
RAP1B-223ENST00000541167 CXXC1Q9P0U4 656 aaPredicted RBP22.53■■□□□ 1.2
RAP1B-223ENST00000541167 ARID2Q68CP9 1835 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 GBF1Q92538 1859 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 SMIM35A0A1B0GVV1 85 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 DKC1O60832 514 aaKnown RBP eCLIP22.52■■□□□ 1.2
RAP1B-223ENST00000541167 C22orf31O95567 290 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 P4HBP07237 508 aaKnown RBP22.52■■□□□ 1.2
RAP1B-223ENST00000541167 TOB1P50616 345 aaPredicted RBP22.52■■□□□ 1.2
RAP1B-223ENST00000541167 MRPS6P82932 125 aaKnown RBP22.52■■□□□ 1.2
RAP1B-223ENST00000541167 FAM26DQ5JW98 314 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 RASIP1Q5U651 963 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 CNKSR3Q6P9H4 555 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 CDY2AQ9Y6F7 541 aa22.52■■□□□ 1.2
RAP1B-223ENST00000541167 M0QZ92 97 aa22.51■■□□□ 1.19
RAP1B-223ENST00000541167 DLL1O00548 723 aa22.51■■□□□ 1.19
RAP1B-223ENST00000541167 CHRNA1P02708 482 aa22.51■■□□□ 1.19
RAP1B-223ENST00000541167 MGAT3Q09327 533 aa22.51■■□□□ 1.19
RAP1B-223ENST00000541167 TMEM62Q0P6H9 643 aa22.51■■□□□ 1.19
RAP1B-223ENST00000541167 MTERF2Q49AM1 385 aa22.51■■□□□ 1.19
RAP1B-223ENST00000541167 RILPL1Q5EBL4 403 aa22.51■■□□□ 1.19
RAP1B-223ENST00000541167 DYDC2Q96IM9 177 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms