RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ZNFX1Q9P2E3 1918 aaKnown RBP13.6□□□□□ -0.23
AP003559.1-201ENST00000540906 MCM3APO60318 1980 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 PFASO15067 1338 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 MYH11P35749 1972 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 RASSF10A6NK89 507 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 LGALS16A8MUM7 142 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 WDR64B1ANS9 1081 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 LYPLA2O95372 231 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 SFPQP23246 707 aaKnown RBP eCLIP13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 RARRES1P49788 294 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 NPEPPSP55786 919 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 KRT76Q01546 638 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 RBL2Q08999 1139 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 ZC2HC1CQ53FD0 456 aaPredicted RBP13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 PADI6Q6TGC4 694 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 SEPT14Q6ZU15 432 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 KCTD17Q8N5Z5 321 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 DNERQ8NFT8 737 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 NOC3LQ8WTT2 800 aaKnown RBP13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 PTPN18Q99952 460 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 TUBGCP2Q9BSJ2 902 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 TMX1Q9H3N1 280 aa13.59□□□□□ -0.23
AP003559.1-201ENST00000540906 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.23
AP003559.1-201ENST00000540906 ARID2Q68CP9 1835 aa13.58□□□□□ -0.23
AP003559.1-201ENST00000540906 CCL15-CCL14A0A0B4J2E2 113 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 ARHGEF35A5YM69 484 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 PDHXO00330 501 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 HIP1RO75146 1068 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 TBCAO75347 108 aaKnown RBP13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 FAM13AO94988 1023 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 GYPCP04921 128 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 FXR1P51114 621 aaKnown RBP eCLIP13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 JAK3P52333 1124 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 ZNF131P52739 623 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 ERVK-9P63128 1117 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 ERVK-24P63145 666 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 UBXN1Q04323 297 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 STXBP2Q15833 593 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 CCL15Q16663 113 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 TMEM63BQ5T3F8 832 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 ZNF746Q6NUN9 644 aaPredicted RBP13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 EEPD1Q7L9B9 569 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 CCDC60Q8IWA6 550 aaPredicted RBP13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 IWS1Q96ST2 819 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 SENP7Q9BQF6 1050 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 GABBR1Q9UBS5 961 aa13.58□□□□□ -0.24
AP003559.1-201ENST00000540906 DNAJC25-GNG10A0A024R161 153 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 USO1O60763 962 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 EIF3JO75822 258 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 YWHABP31946 246 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ICAM3P32942 547 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ACTR2P61160 394 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 LRRC63Q05C16 580 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 FILIP1LQ4L180 1135 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 SPRYD7Q5W111 196 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ANO5Q75V66 913 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 CYFIP1Q7L576 1253 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ZC3H3Q8IXZ2 948 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 C4orf19Q8IY42 314 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 MAF1Q9H063 256 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 MRPL44Q9H9J2 332 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 JPH1Q9HDC5 661 aaPredicted RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 GPRC5CQ9NQ84 441 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 MAGEC2Q9UBF1 373 aaPredicted RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 DBR1Q9UK59 544 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 COL4A3BPQ9Y5P4 624 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 NFASCO94856 1347 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ARIH2O95376 493 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 GCNT3O95395 438 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 SLC25A27O95847 323 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 PRKCSHP14314 528 aaPredicted RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 UBA1P22314 1058 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 GUCY2CP25092 1073 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 SOX10P56693 466 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 PSMC5P62195 406 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 BMT2Q1RMZ1 405 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ABHD15Q6UXT9 468 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ANKRD13CQ8N6S4 541 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 MMP19Q99542 508 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 SLC9A2Q9UBY0 812 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 ITIH6Q6UXX5 1313 aa13.57□□□□□ -0.24
AP003559.1-201ENST00000540906 MAFGO15525 162 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 TGFB1I1O43294 461 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 ATP4AP20648 1035 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 CASP14P31944 242 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 SFNP31947 248 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 WDR78Q5VTH9 848 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 E4F1Q66K89 784 aaPredicted RBP13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 SWSAP1Q6NVH7 229 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 CCDC155Q8N6L0 562 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 OLFML3Q9NRN5 406 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 PCDHA10Q9Y5I2 948 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 PLXNB2O15031 1838 aa13.56□□□□□ -0.24
AP003559.1-201ENST00000540906 UNCXA6NJT0 531 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms