RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 TP53P04637 393 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-209ENST00000540819 GRK4P32298 578 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 NUCB1Q02818 461 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 MAP4K2Q12851 820 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 TUBB8Q3ZCM7 444 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 INTS11Q5TA45 600 aaKnown RBP6.44□□□□□ -1.38
PRKDC-209ENST00000540819 TMPRSS7Q7RTY8 843 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 SLFN12Q8IYM2 578 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 MYLIPQ8WY64 445 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 MRGPRX3Q96LB0 322 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 SLC6A18Q96N87 628 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 WDR12Q9GZL7 423 aaKnown RBP6.44□□□□□ -1.38
PRKDC-209ENST00000540819 AGO4Q9HCK5 861 aaKnown RBP6.44□□□□□ -1.38
PRKDC-209ENST00000540819 ZNF652Q9Y2D9 606 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 FRMD4BQ9Y2L6 1034 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 LRCH1Q9Y2L9 728 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 LRRFIP2Q9Y608 721 aaKnown RBP6.44□□□□□ -1.38
PRKDC-209ENST00000540819 ITIH6Q6UXX5 1313 aa6.44□□□□□ -1.38
PRKDC-209ENST00000540819 KLHL33A6NCF5 533 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 A6NNZ2 444 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 CHURC1-FNTBB4DL54 471 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 TBX1O43435 398 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 CBFA2T2O43439 604 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHGA12O60330 932 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PPM1BO75688 479 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 RPN1P04843 607 aaKnown RBP6.43□□□□□ -1.38
PRKDC-209ENST00000540819 KCNA6P17658 529 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 POLR2BP30876 1174 aaKnown RBP6.43□□□□□ -1.38
PRKDC-209ENST00000540819 CHKAP35790 457 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 ETV3P41162 512 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 HTRA3P83110 453 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 NTRK3Q16288 839 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 C1QTNF12Q5T7M4 302 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 TSHZ3Q63HK5 1081 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 TLDC1Q6P9B6 456 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 POMZP3Q6PJE2 187 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 C16orf54Q6UWD8 224 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 C1orf122Q6ZSJ8 110 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 GET4Q7L5D6 327 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-209ENST00000540819 C1QL4Q86Z23 238 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 CREBRFQ8IUR6 639 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 TRIM59Q8IWR1 403 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 CLRN3Q8NCR9 226 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PIWIL2Q8TC59 973 aaKnown RBP6.43□□□□□ -1.38
PRKDC-209ENST00000540819 KCNN1Q92952 543 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 FGD4Q96M96 766 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 EIF2AK1Q9BQI3 630 aaKnown RBP6.43□□□□□ -1.38
PRKDC-209ENST00000540819 KIAA1586Q9HCI6 787 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 ARFGAP3Q9NP61 516 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 SPTLC3Q9NUV7 552 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 FAM86C1Q9NVL1 165 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 C14orf119Q9NWQ9 140 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 INVSQ9Y283 1065 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHGA9Q9Y5G4 932 aaKnown RBP6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHGA8Q9Y5G5 932 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHGA7Q9Y5G6 932 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHGA6Q9Y5G7 932 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHGA3Q9Y5H0 932 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 PCDHGA2Q9Y5H1 932 aa6.43□□□□□ -1.38
PRKDC-209ENST00000540819 BLACEA4D250 179 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 TCAF2A6NFQ2 919 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 RASA4BC9J798 803 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 K7ENM7 598 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 RASA4O43374 803 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 XPOTO43592 962 aaKnown RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 PQBP1O60828 265 aaKnown RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 GLRX3O76003 335 aaKnown RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 POLD1P28340 1107 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 HK2P52789 917 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 FAM193AP78312 1265 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 TNK2Q07912 1038 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 IFIT5Q13325 482 aaKnown RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 WDR45BQ5MNZ6 344 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 TDRD10Q5VZ19 366 aaKnown RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 LILRA6Q6PI73 481 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 LCNL1Q6ZST4 164 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 ADAT2Q7Z6V5 191 aaKnown RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 CREG2Q8IUH2 290 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 TMEM192Q8IY95 271 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 TTC30BQ8N4P2 665 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 BTN2A2Q8WVV5 523 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 DIO2Q92813 273 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 CCDC140Q96MF4 163 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 LGR4Q9BXB1 951 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 LRRC27Q9C0I9 530 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 MYLK2Q9H1R3 596 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 ALDH8A1Q9H2A2 487 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 CABP5Q9NP86 173 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 RIC8AQ9NPQ8 531 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 THG1LQ9NWX6 298 aaKnown RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 PDP2Q9P2J9 529 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 TMEM59LQ9UK28 342 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 GJD2Q9UKL4 321 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 GPR52Q9Y2T5 361 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 EMC9Q9Y3B6 208 aa6.42□□□□□ -1.38
PRKDC-209ENST00000540819 CTDP1Q9Y5B0 961 aaPredicted RBP6.42□□□□□ -1.38
PRKDC-209ENST00000540819 RGS13O14921 159 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms