RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 SCOCQ9UIL1 159 aa14.08□□□□□ -0.16
DNMT1-203ENST00000540357 A0A0U1RQJ8 604 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 GGPS1O95749 300 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 PLEKP08567 350 aaPredicted RBP14.07□□□□□ -0.16
DNMT1-203ENST00000540357 SKIP12755 728 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 CHN1P15882 459 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 LGSNQ5TDP6 509 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 WDR78Q5VTH9 848 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 PPP1R18Q6NYC8 613 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 DPP8Q6V1X1 898 aaPredicted RBP14.07□□□□□ -0.16
DNMT1-203ENST00000540357 FRMD5Q7Z6J6 570 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 FNBP1Q96RU3 617 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 VCX3BQ9H321 246 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 SLC24A3Q9HC58 644 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 SRRM3A6NNA2 597 aaPredicted RBP14.07□□□□□ -0.16
DNMT1-203ENST00000540357 CRKLP46109 303 aaKnown RBP14.07□□□□□ -0.16
DNMT1-203ENST00000540357 ANKS1AQ92625 1134 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 RBM17Q96I25 401 aaKnown RBP14.07□□□□□ -0.16
DNMT1-203ENST00000540357 CFAP57Q96MR6 1250 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 KBTBD4Q9NVX7 518 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 FAM208AQ9UK61 1670 aaKnown RBP14.07□□□□□ -0.16
DNMT1-203ENST00000540357 PNMA6FA0A0J9YX94 578 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 TMOD1P28289 359 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 MFAP3P55082 362 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 SESN3P58005 492 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 OR2W6PQ8NHA6 318 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 SPATA20Q8TB22 786 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 RFFLQ8WZ73 363 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 GRAMD1AQ96CP6 724 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 SPDL1Q96EA4 605 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 TSC22D3Q99576 134 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 PITPNM3Q9BZ71 974 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 A0A087X0B3 334 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 SNAP23O00161 211 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 VPS41P49754 854 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 USP11P51784 963 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 TROAPQ12815 778 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 HSD3B7Q9H2F3 369 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 DNAJC5Q9H3Z4 198 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 EHD2Q9NZN4 543 aa14.07□□□□□ -0.16
DNMT1-203ENST00000540357 CLIC2O15247 247 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 CAV1Q03135 178 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 CREG2Q8IUH2 290 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 DAGLBQ8NCG7 672 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 CCDC110Q8TBZ0 833 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 USTQ9Y2C2 406 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 ATXN2Q99700 1313 aaKnown RBP14.06□□□□□ -0.16
DNMT1-203ENST00000540357 OTUD6AQ7L8S5 288 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 MORC4Q8TE76 937 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 TRIM11Q96F44 468 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 ZC3H12CQ9C0D7 883 aaKnown RBP14.06□□□□□ -0.16
DNMT1-203ENST00000540357 KDM4CQ9H3R0 1056 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 RAB20Q9NX57 234 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 GGA2Q9UJY4 613 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 PCDHA1Q9Y5I3 950 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 GAS7O60861 476 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 CCND1P24385 295 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 HSPA9P38646 679 aaKnown RBP14.06□□□□□ -0.16
DNMT1-203ENST00000540357 RWDD2BP57060 319 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 HOOK2Q96ED9 719 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 POLD4Q9HCU8 107 aa14.06□□□□□ -0.16
DNMT1-203ENST00000540357 TTI1O43156 1089 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 TTLL1O95922 423 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 KLRC1P26715 233 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 NR1H3Q13133 447 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 TMED2Q15363 201 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 USH1GQ495M9 461 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 TRPM8Q7Z2W7 1104 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 ZNF653Q96CK0 615 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 TSNARE1Q96NA8 513 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 IRX4P78413 519 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 PKN1Q16512 942 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 KNOP1Q1ED39 458 aaKnown RBP14.05□□□□□ -0.16
DNMT1-203ENST00000540357 GDF3Q9NR23 364 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 DNAJC12Q9UKB3 198 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 ACSL3O95573 720 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 NR3C1P04150 777 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 SCTRP47872 440 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 MAP7Q14244 749 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 ITIH4Q14624 930 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 SEC23AQ15436 765 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 SBK1Q52WX2 424 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 KIAA1755Q5JYT7 1200 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.05□□□□□ -0.16
DNMT1-203ENST00000540357 HPS3Q969F9 1004 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 PRMT1Q99873 361 aaKnown RBP14.05□□□□□ -0.16
DNMT1-203ENST00000540357 DNAI2Q9GZS0 605 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 TMEM60Q9H2L4 133 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 ZBTB21Q9ULJ3 1066 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 ARL2BPQ9Y2Y0 163 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 RIMS1Q86UR5 1692 aaKnown RBP14.05□□□□□ -0.16
DNMT1-203ENST00000540357 K7ENM7 598 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 PRPF6O94906 941 aaKnown RBP14.05□□□□□ -0.16
DNMT1-203ENST00000540357 CDK8P49336 464 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 CNBD1Q8NA66 436 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 PRPF38AQ8NAV1 312 aaKnown RBP14.05□□□□□ -0.16
DNMT1-203ENST00000540357 SH3GL3Q99963 347 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 NOD2Q9HC29 1040 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 USP40Q9NVE5 1235 aa14.05□□□□□ -0.16
DNMT1-203ENST00000540357 ARHGAP20Q9P2F6 1191 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms