RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 ASIC4Q96FT7 647 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 SLKQ9H2G2 1235 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-219ENST00000539952 TLE6Q9H808 572 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 KAT14Q9H8E8 782 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 JMJD4Q9H9V9 463 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 RC3H2Q9HBD1 1191 aaKnown RBP6.87□□□□□ -1.31
CPSF7-219ENST00000539952 FAM86C1Q9NVL1 165 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 USP15Q9Y4E8 981 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-219ENST00000539952 PTPRSQ13332 1948 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 CACNA1HO95180 2353 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 ZDBF2Q9HCK1 2354 aa6.87□□□□□ -1.31
CPSF7-219ENST00000539952 MYH7P12883 1935 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 TANC1Q9C0D5 1861 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 GCOM1H8Y6P7 765 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 ZNF213O14771 459 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 POLR2MP0CAP2 368 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 XRCC6P12956 609 aaKnown RBP eCLIP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 HOXB8P17481 243 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 UBA1P22314 1058 aaKnown RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 VCPP55072 806 aaKnown RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 MFAP1P55081 439 aaKnown RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 ARHGAP4P98171 946 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 PTPN21Q16825 1174 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 IER5Q5VY09 327 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 MCTP2Q6DN12 878 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 ZBTB33Q86T24 672 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 RBM23Q86U06 439 aaKnown RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 UBALD2Q8IYN6 164 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 KRI1Q8N9T8 703 aaKnown RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 KLHL23Q8NBE8 558 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 GIMAP8Q8ND71 665 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 ATP8B4Q8TF62 1192 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 NLRP7Q8WX94 980 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 SUSD6Q92537 303 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 NKD2Q969F2 451 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 TRIM44Q96DX7 344 aaPredicted RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 NEK1Q96PY6 1258 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 EPAS1Q99814 870 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 SENP7Q9BQF6 1050 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 OSBPL7Q9BZF2 842 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 CPVLQ9H3G5 476 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 AAASQ9NRG9 546 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 PCDHB12Q9Y5F1 795 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 PCDHA1Q9Y5I3 950 aa6.86□□□□□ -1.31
CPSF7-219ENST00000539952 RIF1Q5UIP0 2472 aaKnown RBP6.86□□□□□ -1.31
CPSF7-219ENST00000539952 ZFHX2Q9C0A1 2572 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-219ENST00000539952 ZMYM6O95789 1325 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 COL4A6Q14031 1691 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 RRN3P2A6NIE6 340 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 TRIM6-TRIM34B2RNG4 842 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 SPATA31C2B4DYI2 1134 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 TRIM66O15016 1216 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 ZBTB5O15062 677 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 RRP9O43818 475 aaKnown RBP6.85□□□□□ -1.31
CPSF7-219ENST00000539952 SORBS3O60504 671 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 GHRP10912 638 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 MX1P20591 662 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 DNAJB1P25685 340 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 LPIN1Q14693 890 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 FBXO47Q5MNV8 452 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 TYW1BQ6NUM6 668 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 TSHZ1Q6ZSZ6 1077 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 CYFIP1Q7L576 1253 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 ASCL5Q7RTU5 278 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 ADGRD2Q7Z7M1 963 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 RTN4RL1Q86UN2 441 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-219ENST00000539952 NPAS4Q8IUM7 802 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 CRIPAKQ8N1N5 446 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 NME8Q8N427 588 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 RASGRP4Q8TDF6 673 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 ZSCAN10Q96SZ4 725 aaPredicted RBP6.85□□□□□ -1.31
CPSF7-219ENST00000539952 GPR20Q99678 358 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 PUF60Q9UHX1 559 aaKnown RBP6.85□□□□□ -1.31
CPSF7-219ENST00000539952 LRFN2Q9ULH4 789 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 NR2E1Q9Y466 385 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 LCTP09848 1927 aa6.85□□□□□ -1.31
CPSF7-219ENST00000539952 COL4A4P53420 1690 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-219ENST00000539952 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 KLRF2D3W0D1 207 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 C3orf80F5H4A9 247 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 PER2O15055 1255 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 FIBPO43427 364 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 PPFIA3O75145 1194 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 KDM4AO75164 1064 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 HSP90AA1P07900 732 aaKnown RBP6.84□□□□□ -1.31
CPSF7-219ENST00000539952 HOXA13P31271 388 aaPredicted RBP6.84□□□□□ -1.31
CPSF7-219ENST00000539952 CLCN5P51795 746 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 TERF1P54274 439 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 HAND2P61296 217 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 NUCB1Q02818 461 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 MGAT3Q09327 533 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 MTMR3Q13615 1198 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 DUSP6Q16828 381 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 BMP2KLQ5H9B9 411 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 UTP14CQ5TAP6 766 aaKnown RBP6.84□□□□□ -1.31
CPSF7-219ENST00000539952 XRRA1Q6P2D8 792 aa6.84□□□□□ -1.31
CPSF7-219ENST00000539952 CLEC17AQ6ZS10 378 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms