RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 ZSCAN5CA6NGD5 496 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 E9PMD0 336 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 H0YHG0 523 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 GNPATO15228 680 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 SART1O43290 800 aaKnown RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 CEP104O60308 925 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 PAEPP09466 180 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 H2AFZP0C0S5 128 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 FERP16591 822 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 ECHS1P30084 290 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 FNTAP49354 379 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 ERVK-9P63128 1117 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 GUCY1A3Q02108 690 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 MFSD14BQ5SR56 506 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 H2AFVQ71UI9 128 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 EPM2AIP1Q7L775 607 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 ZNF571Q7Z3V5 609 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 CCDC91Q7Z6B0 441 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 KLHL7Q8IXQ5 586 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 SYT2Q8N9I0 419 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 NAP1L3Q99457 506 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 PACSIN1Q9BY11 444 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 KIF13BQ9NQT8 1826 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 CCDC172P0C7W6 258 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 ZBTB48P10074 688 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 PON1P27169 355 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 CTNNA1P35221 906 aaKnown RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 ARID5AQ03989 594 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 NFIXQ14938 502 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 NFIL3Q16649 462 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 TTC19Q6DKK2 380 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 PEX26Q7Z412 305 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 CERKQ8TCT0 537 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 KAT2BQ92831 832 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 CNOT10Q9H9A5 744 aaKnown RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 TYW1Q9NV66 732 aaKnown RBP14.48□□□□□ -0.09
UBE3B-209ENST00000539584 DNM3Q9UQ16 869 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 CAPN7Q9Y6W3 813 aa14.48□□□□□ -0.09
UBE3B-209ENST00000539584 GMNCA6NCL1 334 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 RPA1P27694 616 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 JAM2P57087 298 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 UBE2SQ16763 222 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 C6orf89Q6UWU4 347 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 CROCCP2Q86T23 111 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 LRRC47Q8N1G4 583 aaKnown RBP14.47□□□□□ -0.09
UBE3B-209ENST00000539584 CCDC17Q96LX7 622 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 RAB17Q9H0T7 212 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 GPCPD1Q9NPB8 672 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 GEMIN8Q9NWZ8 242 aaKnown RBP14.47□□□□□ -0.09
UBE3B-209ENST00000539584 SLC12A6Q9UHW9 1150 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 SERPINB13Q9UIV8 391 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 PACSIN2Q9UNF0 486 aaPredicted RBP14.47□□□□□ -0.09
UBE3B-209ENST00000539584 STXBP5LQ9Y2K9 1186 aa14.47□□□□□ -0.09
UBE3B-209ENST00000539584 UTP11Q9Y3A2 253 aaKnown RBP14.47□□□□□ -0.09
UBE3B-209ENST00000539584 NOC2LQ9Y3T9 749 aaKnown RBP14.47□□□□□ -0.09
UBE3B-209ENST00000539584 POTEB3A0JP26 581 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 POTECB2RU33 542 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 KRIT1O00522 736 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 PPP1R11O60927 126 aaPredicted RBP14.46□□□□□ -0.09
UBE3B-209ENST00000539584 BBOX1O75936 387 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 UFL1O94874 794 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 ERCC3P19447 782 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 SMTNP53814 917 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 GPSM2P81274 684 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 GIT2Q14161 759 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 EPHA7Q15375 998 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 Q4G0T1 1027 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 ARSHQ5FYA8 562 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 POTEBQ6S5H4 581 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 METTL13Q8N6R0 699 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 CNBD1Q8NA66 436 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 RPGRQ92834 1020 aaKnown RBP14.46□□□□□ -0.09
UBE3B-209ENST00000539584 ARHGEF1Q92888 912 aaKnown RBP14.46□□□□□ -0.09
UBE3B-209ENST00000539584 HES6Q96HZ4 224 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 FAM20AQ96MK3 541 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 VCPKMTQ9H867 229 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 TBC1D7Q9P0N9 293 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 FOCADQ5VW36 1801 aa14.46□□□□□ -0.09
UBE3B-209ENST00000539584 GOLGA6L7A0A1B0GV03 622 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 TRAPPC3O43617 180 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 PPP1R12BO60237 982 aaPredicted RBP14.46□□□□□ -0.1
UBE3B-209ENST00000539584 TRIM37O94972 964 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 AKR1B1P15121 316 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 LMNB1P20700 586 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 PPP2R2AP63151 447 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 ACTN3Q08043 901 aaPredicted RBP14.46□□□□□ -0.1
UBE3B-209ENST00000539584 ZNF844Q08AG5 666 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 CRY2Q49AN0 593 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 FGFBP2Q9BYJ0 223 aa14.46□□□□□ -0.1
UBE3B-209ENST00000539584 C5orf60A6NFR6 353 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 E7EVH7 732 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 FOSP01100 380 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-209ENST00000539584 GAP43P17677 238 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 SLC9A1P19634 815 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 GBP1P32455 592 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 STAT1P42224 750 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 DNA2P51530 1060 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 MNAT1P51948 309 aa14.45□□□□□ -0.1
UBE3B-209ENST00000539584 DPP8Q6V1X1 898 aaPredicted RBP14.45□□□□□ -0.1
UBE3B-209ENST00000539584 CENPTQ96BT3 561 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms