RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 PRKAG2Q9UGJ0 569 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 NRBP1Q9UHY1 535 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 PCDHB6Q9Y5E3 794 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SYNGAP1Q96PV0 1343 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 GOLGA8SH3BPF8 625 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ENC1O14682 589 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 PEX3P56589 373 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 DSTYKQ6XUX3 929 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 APOBEC3FQ8IUX4 373 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 UHMK1Q8TAS1 419 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 NUDCD1Q96RS6 583 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 MSTO1Q9BUK6 570 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SMYD2Q9NRG4 433 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 PYCARDQ9ULZ3 195 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ELF1P32519 619 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 CRKP46108 304 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 PRELPP51888 382 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ANKRD13CQ8N6S4 541 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 TTC13Q8NBP0 860 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SH3RF3Q8TEJ3 882 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 NLRP4Q96MN2 994 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SERPINI1Q99574 410 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 MTA3Q9BTC8 594 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 TXLNGQ9NUQ3 528 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 FBXO40Q9UH90 709 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ADGRB3O60242 1522 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 E9PCH4 1651 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 ZNF189O75820 626 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 RFC1P35251 1148 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 CAV1Q03135 178 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 STXBP2Q15833 593 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 C2orf40Q9H1Z8 148 aa6.98□□□□□ -1.29
LSAMP-207ENST00000539563 PIH1D3Q9NQM4 214 aaKnown RBP6.98□□□□□ -1.29
LSAMP-207ENST00000539563 SOWAHDA6NJG2 315 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 PLTPP55058 493 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 MTMR1Q13613 665 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TMED2Q15363 201 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TBC1D9BQ66K14 1250 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 SAMSN1Q9NSI8 373 aaKnown RBP6.97□□□□□ -1.29
LSAMP-207ENST00000539563 SUGT1Q9Y2Z0 365 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 WDR64B1ANS9 1081 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 COBLO75128 1261 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 SETSIPP0DME0 302 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 FDX1P10109 184 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ADRA2BP18089 450 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 BASP1P80723 227 aaKnown RBP6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ART3Q13508 389 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 RASGRF1Q13972 1273 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 OR6B2Q6IFH4 312 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 PYROXD1Q8WU10 500 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ZMYND12Q9H0C1 365 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 OVOS2A0A0G2JMS6 1433 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 OVOS2A0A0J9YW53 1432 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 OVOS2Q6IE36 1432 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 FAM170AA1A519 330 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ZBTB5O15062 677 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 RWDD2BP57060 319 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 DR1Q01658 176 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 EEF2KMTQ96G04 330 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TACO1Q9BSH4 297 aaKnown RBP6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TRIM15Q9C019 465 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TBC1D22BQ9NU19 505 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 KIF20BQ96Q89 1820 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 MCAMP43121 646 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 GRAMD1CQ8IYS0 662 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 PGBD1Q96JS3 809 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 FGFR1OP2Q9NVK5 253 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ABCB11O95342 1321 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 MAPK13O15264 365 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 CXCR5P32302 372 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TMTC4Q5T4D3 741 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TRIM68Q6AZZ1 485 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 RBM41Q96IZ5 413 aaKnown RBP6.97□□□□□ -1.29
LSAMP-207ENST00000539563 CYP26B1Q9NR63 512 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 CEP72Q9P209 647 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ABCA6Q8N139 1617 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ZBED1O96006 694 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 TBXAS1P24557 533 aaPredicted RBP6.97□□□□□ -1.29
LSAMP-207ENST00000539563 CCT5P48643 541 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 KYAT1Q16773 422 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 DYNLL2Q96FJ2 89 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 GCOM2Q9BZD3 368 aaPredicted RBP6.97□□□□□ -1.29
LSAMP-207ENST00000539563 ACTR5Q9H9F9 607 aaPredicted RBP6.97□□□□□ -1.29
LSAMP-207ENST00000539563 STRIP2Q9ULQ0 834 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 MINPP1Q9UNW1 487 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 SPATA31A3Q5VYP0 1347 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 CDHR2Q9BYE9 1310 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 REREQ9P2R6 1566 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 CLDN3O15551 220 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 PSMA2P25787 234 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 COPB2P35606 906 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 MAP2K2P36507 400 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 MAPK6Q16659 721 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 SARM1Q6SZW1 724 aa6.97□□□□□ -1.29
LSAMP-207ENST00000539563 GNGT2O14610 69 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 SFNP31947 248 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 ALX1Q15699 326 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 TTC39CQ8N584 583 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 MICAL1Q8TDZ2 1067 aa6.96□□□□□ -1.29
LSAMP-207ENST00000539563 KLC2Q9H0B6 622 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms