RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 YEATS4O95619 227 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 RTP1P59025 263 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 PRKCEQ02156 737 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 TLE2Q04725 743 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 FAAP100Q0VG06 881 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 TARBP2Q15633 366 aaKnown RBP14.59□□□□□ -0.07
CCDC42-202ENST00000539522 BRDTQ58F21 947 aaPredicted RBP14.59□□□□□ -0.07
CCDC42-202ENST00000539522 SPECC1Q5M775 1068 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 PDXDC2PQ6P474 469 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 NFRKBQ6P4R8 1299 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 DTHD1Q6ZMT9 781 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 SH3RF1Q7Z6J0 888 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 ATP8B4Q8TF62 1192 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 LMBR1Q8WVP7 490 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 GLG1Q92896 1179 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 LXNQ9BS40 222 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 SETD4Q9NVD3 440 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 SAMM50Q9Y512 469 aa14.59□□□□□ -0.07
CCDC42-202ENST00000539522 A0A087X0B3 334 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 POTEB3A0JP26 581 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 DDX11L8A8MPP1 907 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 MARCH6O60337 910 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 LYPLA2O95372 231 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 OATP04181 439 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 P4HBP07237 508 aaKnown RBP14.58□□□□□ -0.08
CCDC42-202ENST00000539522 INSRRP14616 1297 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 ITGB8P26012 769 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 QARSP47897 775 aaKnown RBP14.58□□□□□ -0.08
CCDC42-202ENST00000539522 CHMP4BP1P59074 171 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 PSMC5P62195 406 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 GRB10Q13322 594 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 TRIM71Q2Q1W2 868 aaKnown RBP14.58□□□□□ -0.08
CCDC42-202ENST00000539522 PLA2G4FQ68DD2 849 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 POTEBQ6S5H4 581 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 POTEGQ6S5H5 508 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
CCDC42-202ENST00000539522 EPSTI1Q96J88 318 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 ZNF396Q96N95 335 aaPredicted RBP14.58□□□□□ -0.08
CCDC42-202ENST00000539522 POLR3CQ9BUI4 534 aaPredicted RBP14.58□□□□□ -0.08
CCDC42-202ENST00000539522 GDPD2Q9HCC8 539 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 LRWD1Q9UFC0 647 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 TANC1Q9C0D5 1861 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 KAT6AQ92794 2004 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 EVPLQ92817 2033 aa14.58□□□□□ -0.08
CCDC42-202ENST00000539522 MBLAC1A4D2B0 266 aaPredicted RBP14.57□□□□□ -0.08
CCDC42-202ENST00000539522 SPTLC2O15270 562 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 TREHO43280 583 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 PPP6R2O75170 966 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 BMP15O95972 392 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 RPA1P27694 616 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 SLC26A2P50443 739 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 GRIK4Q16099 956 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 HYIQ5T013 277 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 FAM160B1Q5W0V3 765 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 ATL3Q6DD88 541 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 TRAF7Q6Q0C0 670 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 SHC4Q6S5L8 630 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 RUFY4Q6ZNE9 571 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 TRMT1LQ7Z2T5 733 aaKnown RBP14.57□□□□□ -0.08
CCDC42-202ENST00000539522 C4orf19Q8IY42 314 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 LINC01465Q8N7H1 131 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 VWCEQ96DN2 955 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 KATNAL1Q9BW62 490 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 NIFKQ9BYG3 293 aaKnown RBP14.57□□□□□ -0.08
CCDC42-202ENST00000539522 AZI2Q9H6S1 392 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 PCDHA7Q9UN72 937 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 CEP131Q9UPN4 1083 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 UMODL1Q5DID0 1318 aa14.57□□□□□ -0.08
CCDC42-202ENST00000539522 SCN5AQ14524 2016 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 TRIM43BA6NCK2 446 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 PQBP1O60828 265 aaKnown RBP14.56□□□□□ -0.08
CCDC42-202ENST00000539522 C22orf31O95567 290 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 NPEPPSP55786 919 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 PTPN11Q06124 597 aaPredicted RBP14.56□□□□□ -0.08
CCDC42-202ENST00000539522 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
CCDC42-202ENST00000539522 STK38Q15208 465 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 TMEM119Q4V9L6 283 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 TPH2Q8IWU9 490 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 BBXQ8WY36 941 aaPredicted RBP14.56□□□□□ -0.08
CCDC42-202ENST00000539522 VTI1AQ96AJ9 217 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 TRIM43Q96BQ3 446 aaPredicted RBP14.56□□□□□ -0.08
CCDC42-202ENST00000539522 TOX2Q96NM4 488 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 OSBPL7Q9BZF2 842 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 TUFT1Q9NNX1 390 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 PDLIM7Q9NR12 457 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 TBX21Q9UL17 535 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 ZNF215Q9UL58 517 aaPredicted RBP14.56□□□□□ -0.08
CCDC42-202ENST00000539522 ATP11BQ9Y2G3 1177 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 LOXHD1Q8IVV2 1947 aa14.56□□□□□ -0.08
CCDC42-202ENST00000539522 HBP1O60381 514 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 CYP2C9P11712 490 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 LONP1P36776 959 aaKnown RBP14.55□□□□□ -0.08
CCDC42-202ENST00000539522 PPFIA1Q13136 1202 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 DRP2Q13474 957 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 GPNMBQ14956 572 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 CSPP1Q1MSJ5 1256 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 TMEM266Q2M3C6 531 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 NAALADL2Q58DX5 795 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 XKR3Q5GH77 459 aa14.55□□□□□ -0.08
CCDC42-202ENST00000539522 FAM47CQ5HY64 1035 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms