RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 GABBR1Q9UBS5 961 aa17.72■□□□□ 0.43
CIT-210ENST00000539413 DDX25Q9UHL0 483 aaKnown RBP17.72■□□□□ 0.43
CIT-210ENST00000539413 PCDHA11Q9Y5I1 949 aa17.72■□□□□ 0.43
CIT-210ENST00000539413 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
CIT-210ENST00000539413 TET1Q8NFU7 2136 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 ABHD14A-ACY1A0A1B0GW23 586 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 FAM205CA6NFA0 338 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 WDR64B1ANS9 1081 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 CHMP2AO43633 222 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 SLC37A4O43826 429 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 HBP1O60381 514 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 PSMD10O75832 226 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 KRT2P35908 639 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 MGAT3Q09327 533 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 IKBKEQ14164 716 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 TMCO2Q7Z6W1 182 aaPredicted RBP17.71■□□□□ 0.43
CIT-210ENST00000539413 NEK8Q86SG6 692 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 HERC6Q8IVU3 1022 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 ETNPPLQ8TBG4 499 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 FAM49AQ9H0Q0 323 aaPredicted RBP17.71■□□□□ 0.43
CIT-210ENST00000539413 SLC28A3Q9HAS3 691 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 DISC1Q9NRI5 854 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 PCDHA2Q9Y5H9 948 aa17.71■□□□□ 0.43
CIT-210ENST00000539413 MMP1P03956 469 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 KRT40Q6A162 431 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 MTHFD1LQ6UB35 978 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.7■□□□□ 0.42
CIT-210ENST00000539413 TRMT1LQ7Z2T5 733 aaKnown RBP17.7■□□□□ 0.42
CIT-210ENST00000539413 RSPH3Q86UC2 560 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 CKAP2LQ8IYA6 745 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 TNFRSF25Q93038 417 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 ZSCAN31Q96LW9 406 aaPredicted RBP17.7■□□□□ 0.42
CIT-210ENST00000539413 BRMS1Q9HCU9 246 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 PTPRSQ13332 1948 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 IGSF9BQ9UPX0 1349 aa17.7■□□□□ 0.42
CIT-210ENST00000539413 COL1A2P08123 1366 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 ZBTB42B2RXF5 422 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 KLRC1P26715 233 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 SFNP31947 248 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 MRPS6P82932 125 aaKnown RBP17.69■□□□□ 0.42
CIT-210ENST00000539413 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
CIT-210ENST00000539413 TRIM29Q14134 588 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 ZNF484Q5JVG2 852 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 PPP4R3AQ6IN85 833 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 B3GNT9Q6UX72 402 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 BBXQ8WY36 941 aaPredicted RBP17.69■□□□□ 0.42
CIT-210ENST00000539413 SEPT8Q92599 483 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 CDY2AQ9Y6F7 541 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 SIP14410 1827 aa17.69■□□□□ 0.42
CIT-210ENST00000539413 SMIM35A0A1B0GVV1 85 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 BTBD18B2RXH4 712 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 ZNF862O60290 1169 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 CCNT1O60563 726 aaKnown RBP17.68■□□□□ 0.42
CIT-210ENST00000539413 EFCAB14O75071 495 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 CA3P07451 260 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 GHRP10912 638 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 GCFC2P16383 781 aaKnown RBP17.68■□□□□ 0.42
CIT-210ENST00000539413 JAK3P52333 1124 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 TMEM62Q0P6H9 643 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 RABEP1Q15276 862 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 UGCGQ16739 394 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 PPP2R2DQ66LE6 453 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 MIER3Q7Z3K6 550 aa17.68■□□□□ 0.42
CIT-210ENST00000539413 DIS3L2Q8IYB7 885 aaKnown RBP17.68■□□□□ 0.42
CIT-210ENST00000539413 LLPHQ9BRT6 129 aaKnown RBP17.68■□□□□ 0.42
CIT-210ENST00000539413 UPF2Q9HAU5 1272 aaKnown RBP17.68■□□□□ 0.42
CIT-210ENST00000539413 SH2B1Q9NRF2 756 aaPredicted RBP17.68■□□□□ 0.42
CIT-210ENST00000539413 ARHGEF15O94989 841 aa17.67■□□□□ 0.42
CIT-210ENST00000539413 RPLP2P05387 115 aaKnown RBP17.67■□□□□ 0.42
CIT-210ENST00000539413 FOSL2P15408 326 aa17.67■□□□□ 0.42
CIT-210ENST00000539413 GUCY1B3Q02153 619 aa17.67■□□□□ 0.42
CIT-210ENST00000539413 LPIN1Q14693 890 aa17.67■□□□□ 0.42
CIT-210ENST00000539413 IFIH1Q9BYX4 1025 aaKnown RBP17.67■□□□□ 0.42
CIT-210ENST00000539413 PRDM12Q9H4Q4 367 aa17.67■□□□□ 0.42
CIT-210ENST00000539413 KCNMB3Q9NPA1 279 aa17.67■□□□□ 0.42
CIT-210ENST00000539413 TRPV2Q9Y5S1 764 aa17.67■□□□□ 0.42
CIT-210ENST00000539413 KIF28PB7ZC32 967 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 TLL1O43897 1013 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 C22orf31O95567 290 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 OATP04181 439 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 PRKCEQ02156 737 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 FBXO47Q5MNV8 452 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 IER5Q5VY09 327 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 FAM117BQ6P1L5 589 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 RDM1Q8NG50 284 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 HAS1Q92839 578 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 APBB2Q92870 758 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 FAM167AQ96KS9 214 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 FAM20AQ96MK3 541 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 NAP1L4Q99733 375 aaKnown RBP17.66■□□□□ 0.42
CIT-210ENST00000539413 ZBED2Q9BTP6 218 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 VAV3Q9UKW4 847 aa17.66■□□□□ 0.42
CIT-210ENST00000539413 KAT6AQ92794 2004 aa17.65■□□□□ 0.42
CIT-210ENST00000539413 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.65■□□□□ 0.42
CIT-210ENST00000539413 LCHNA4D1U4 455 aa17.65■□□□□ 0.42
CIT-210ENST00000539413 M0QZ92 97 aa17.65■□□□□ 0.42
CIT-210ENST00000539413 GJB5O95377 273 aa17.65■□□□□ 0.42
CIT-210ENST00000539413 AMHP03971 560 aa17.65■□□□□ 0.42
CIT-210ENST00000539413 KIAA0319LQ8IZA0 1049 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms