RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 LUC7LQ9NQ29 371 aaKnown RBP16.01■□□□□ 0.15
CDCA3-207ENST00000538862 TSKSQ9UJT2 592 aa16.01■□□□□ 0.15
CDCA3-207ENST00000538862 TULP2O00295 520 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 SERPING1P05155 500 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 PLA2G4BP0C869 781 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 CAPN2P17655 700 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 MAP2K2P36507 400 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 NOGQ13253 232 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 SFMBT2Q5VUG0 894 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 MCTP2Q6DN12 878 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 KCTD1Q719H9 257 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 SPATA4Q8NEY3 305 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 CLMNQ96JQ2 1002 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 NOX5Q96PH1 765 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 RNF14Q9UBS8 474 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 KIAA1024Q9UPX6 916 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 PPP1R12BO60237 982 aaPredicted RBP16■□□□□ 0.15
CDCA3-207ENST00000538862 NOL4O94818 638 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 PRPF6O94906 941 aaKnown RBP16■□□□□ 0.15
CDCA3-207ENST00000538862 IVLP07476 585 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 SLC16A2P36021 539 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 MAP2K1Q02750 393 aaPredicted RBP16■□□□□ 0.15
CDCA3-207ENST00000538862 FAM83BQ5T0W9 1011 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 TRIM59Q8IWR1 403 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 SLFN12Q8IYM2 578 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 GOLGA6L1Q8N7Z2 621 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 AENQ8WTP8 325 aaKnown RBP16■□□□□ 0.15
CDCA3-207ENST00000538862 MKL1Q969V6 931 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 CRACR2AQ9BSW2 395 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 SELENOOQ9BVL4 669 aa16■□□□□ 0.15
CDCA3-207ENST00000538862 FRMD3A2A2Y4 597 aa15.99■□□□□ 0.15
CDCA3-207ENST00000538862 E9PMD0 336 aa15.99■□□□□ 0.15
CDCA3-207ENST00000538862 MPHOSPH10O00566 681 aaKnown RBP15.99■□□□□ 0.15
CDCA3-207ENST00000538862 RNF40O75150 1001 aa15.99■□□□□ 0.15
CDCA3-207ENST00000538862 USP2O75604 605 aaPredicted RBP15.99■□□□□ 0.15
CDCA3-207ENST00000538862 GFPT1Q06210 699 aaPredicted RBP15.99■□□□□ 0.15
CDCA3-207ENST00000538862 EDRF1Q3B7T1 1238 aa15.99■□□□□ 0.15
CDCA3-207ENST00000538862 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
CDCA3-207ENST00000538862 ZFPM1Q8IX07 1006 aa15.99■□□□□ 0.15
CDCA3-207ENST00000538862 KCTD10Q9H3F6 313 aa15.99■□□□□ 0.15
CDCA3-207ENST00000538862 FAM204AQ9H8W3 233 aa15.99■□□□□ 0.15
CDCA3-207ENST00000538862 ZMYND10O75800 440 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 SSBP05455 408 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDCA3-207ENST00000538862 CYP11B2P19099 503 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 PAFAH1B1P43034 410 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 ATP2B2Q01814 1243 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 AP3B2Q13367 1082 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 TDRD12Q587J7 1177 aaKnown RBP15.98■□□□□ 0.15
CDCA3-207ENST00000538862 LDLRAD1Q5T700 205 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 CCDC181Q5TID7 509 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 NFRKBQ6P4R8 1299 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 GPBP1Q86WP2 473 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 DCAF4Q8WV16 495 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 TLR10Q9BXR5 811 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 ANO3Q9BYT9 981 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 EMILIN3Q9NT22 766 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 FAM198AQ9UFP1 575 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 SALL4Q9UJQ4 1053 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.98■□□□□ 0.15
CDCA3-207ENST00000538862 PHACTR2O75167 634 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 MYBL2P10244 700 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 QRICH1Q2TAL8 776 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 GLE1Q53GS7 698 aaKnown RBP15.98■□□□□ 0.15
CDCA3-207ENST00000538862 HERC4Q5GLZ8 1057 aaPredicted RBP15.98■□□□□ 0.15
CDCA3-207ENST00000538862 KLHDC7AQ5VTJ3 777 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 HAUS3Q68CZ6 603 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 FAM83AQ86UY5 434 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 AFAP1L1Q8TED9 768 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 SCFD1Q8WVM8 642 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 GJA10Q969M2 543 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 LRRC1Q9BTT6 524 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 LSM14BQ9BX40 385 aaKnown RBP15.98■□□□□ 0.15
CDCA3-207ENST00000538862 NLRC4Q9NPP4 1024 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 NYAP2Q9P242 653 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 PCDHA1Q9Y5I3 950 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 STK24Q9Y6E0 443 aa15.98■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L15C9J2P7 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L13C9JLJ4 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L11C9JVI0 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L18D6R9N7 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L22D6RA61 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L17D6RBQ6 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L19D6RCP7 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L20D6RJB6 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 TBX3O15119 743 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 TLR2O60603 784 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 TNFRSF8P28908 595 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 SLC1A4P43007 532 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L24Q0WX57 530 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
CDCA3-207ENST00000538862 FKBP1CQ5VVH2 108 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 USP17L6PQ6QN14 398 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 DRC1Q96MC2 740 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 AIPL1Q9NZN9 384 aa15.97■□□□□ 0.15
CDCA3-207ENST00000538862 POTEB3A0JP26 581 aa15.96■□□□□ 0.15
CDCA3-207ENST00000538862 CETN3O15182 167 aa15.96■□□□□ 0.15
CDCA3-207ENST00000538862 IREB2P48200 963 aaKnown RBP15.96■□□□□ 0.15
CDCA3-207ENST00000538862 SLC12A3P55017 1021 aa15.96■□□□□ 0.15
CDCA3-207ENST00000538862 POLR2FP61218 127 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms