RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 MEA1Q16626 185 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 TRIM59Q8IWR1 403 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 TYW1Q9NV66 732 aaKnown RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 CYP39A1Q9NYL5 469 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 DNAI1Q9UI46 699 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 DBR1Q9UK59 544 aaKnown RBP16.35■□□□□ 0.21
ATL3-203ENST00000538786 SAMM50Q9Y512 469 aa16.35■□□□□ 0.21
ATL3-203ENST00000538786 SFI1A8K8P3 1242 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 NR2F2P24468 414 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 SFNP31947 248 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 QARSP47897 775 aaKnown RBP16.34■□□□□ 0.21
ATL3-203ENST00000538786 JAK3P52333 1124 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 KRT76Q01546 638 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 DPY19L2Q6NUT2 758 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 WDR59Q6PJI9 974 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 NLRX1Q86UT6 975 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
ATL3-203ENST00000538786 INPP4AQ96PE3 977 aaPredicted RBP16.34■□□□□ 0.21
ATL3-203ENST00000538786 BCAS3Q9H6U6 928 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 POLD4Q9HCU8 107 aa16.34■□□□□ 0.21
ATL3-203ENST00000538786 A1CFQ9NQ94 594 aaKnown RBP16.34■□□□□ 0.21
ATL3-203ENST00000538786 ZNHIT6Q9NWK9 470 aaKnown RBP16.34■□□□□ 0.21
ATL3-203ENST00000538786 ATP9AO75110 1047 aa16.33■□□□□ 0.21
ATL3-203ENST00000538786 PLS1Q14651 629 aa16.33■□□□□ 0.21
ATL3-203ENST00000538786 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.21
ATL3-203ENST00000538786 CHP1Q99653 195 aa16.33■□□□□ 0.21
ATL3-203ENST00000538786 TCEAL9Q9UHQ7 104 aa16.33■□□□□ 0.21
ATL3-203ENST00000538786 FAM184BQ9ULE4 1060 aa16.33■□□□□ 0.21
ATL3-203ENST00000538786 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.33■□□□□ 0.21
ATL3-203ENST00000538786 ASTN1O14525 1302 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 UBE4BO95155 1302 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 WDR64B1ANS9 1081 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 ERCC3P19447 782 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 RPL13P26373 211 aaKnown RBP16.33■□□□□ 0.2
ATL3-203ENST00000538786 TREML2Q5T2D2 321 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 PADI6Q6TGC4 694 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 STXBP4Q6ZWJ1 553 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 CHST13Q8NET6 341 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 RDM1Q8NG50 284 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 L2HGDHQ9H9P8 463 aa16.33■□□□□ 0.2
ATL3-203ENST00000538786 EPN1Q9Y6I3 576 aaPredicted RBP16.33■□□□□ 0.2
ATL3-203ENST00000538786 PAPPA2Q9BXP8 1791 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 STAM2O75886 525 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 NDUFA10O95299 355 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 CCNE2O96020 404 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 NMT1P30419 496 aaKnown RBP16.32■□□□□ 0.2
ATL3-203ENST00000538786 CDK17Q00537 523 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 PPATQ06203 517 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 ZNF720Q7Z2F6 126 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 FRMD5Q7Z6J6 570 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 FAM178BQ8IXR5 827 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 C4orf19Q8IY42 314 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 ZC3H15Q8WU90 426 aaKnown RBP16.32■□□□□ 0.2
ATL3-203ENST00000538786 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 FIZ1Q96SL8 496 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 SENP7Q9BQF6 1050 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 EDEM3Q9BZQ6 932 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 MMRN2Q9H8L6 949 aa16.32■□□□□ 0.2
ATL3-203ENST00000538786 FAM207AQ9NSI2 230 aaPredicted RBP16.32■□□□□ 0.2
ATL3-203ENST00000538786 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
ATL3-203ENST00000538786 SLC16A3O15427 465 aaKnown RBP16.31■□□□□ 0.2
ATL3-203ENST00000538786 HIP1RO75146 1068 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 NR3C1P04150 777 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 HNRNPH3P31942 346 aaKnown RBP16.31■□□□□ 0.2
ATL3-203ENST00000538786 NF2P35240 595 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 RARRES1P49788 294 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 GNG11P61952 73 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 PSMC5P62195 406 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 MAPK7Q13164 816 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 NFIL3Q16649 462 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 ODR4Q5SWX8 454 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 ZNF746Q6NUN9 644 aaPredicted RBP16.31■□□□□ 0.2
ATL3-203ENST00000538786 LBX2Q6XYB7 198 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 PROCA1Q8NCQ7 364 aaPredicted RBP16.31■□□□□ 0.2
ATL3-203ENST00000538786 ACRBPQ8NEB7 543 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 CDHR1Q96JP9 859 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 WDR90Q96KV7 1748 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 COL11A1P12107 1806 aaPredicted RBP16.31■□□□□ 0.2
ATL3-203ENST00000538786 SRCAPQ6ZRS2 3230 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 TGFB1I1O43294 461 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 YWHABP31946 246 aaKnown RBP16.31■□□□□ 0.2
ATL3-203ENST00000538786 PPP2R3AQ06190 1150 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 KCNA1Q09470 495 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 KCNMA1Q12791 1236 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 ERO1BQ86YB8 467 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 ANKRD13AQ8IZ07 590 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 CDCA5Q96FF9 252 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 ELP3Q9H9T3 547 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 LZTFL1Q9NQ48 299 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 ARMCX3Q9UH62 379 aaPredicted RBP16.31■□□□□ 0.2
ATL3-203ENST00000538786 PLAGL2Q9UPG8 496 aa16.31■□□□□ 0.2
ATL3-203ENST00000538786 A0A0G2JLL6 359 aaPredicted RBP16.3■□□□□ 0.2
ATL3-203ENST00000538786 EPHB6O15197 1021 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 FANCGO15287 622 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 ZC2HC1CQ53FD0 456 aaPredicted RBP16.3■□□□□ 0.2
ATL3-203ENST00000538786 PRRT2Q7Z6L0 340 aaPredicted RBP16.3■□□□□ 0.2
ATL3-203ENST00000538786 CCDC170Q8IYT3 715 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 DAW1Q8N136 415 aa16.3■□□□□ 0.2
ATL3-203ENST00000538786 CCDC155Q8N6L0 562 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms