RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HIP1RO75146 1068 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 FAM114A1Q8IWE2 563 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 NACC1Q96RE7 527 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 ACAD9Q9H845 621 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 TRIM10Q9UDY6 481 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 LUC7L2Q9Y383 392 aaKnown RBP15.6■□□□□ 0.09
ACTN1-205ENST00000538545 COL4A3BPQ9Y5P4 624 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 PAPPA2Q9BXP8 1791 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 LCTP09848 1927 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 ARHGEF35A5YM69 484 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 SP2Q02086 613 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 GHRHRQ02643 423 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 NCAPG2Q86XI2 1143 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 ANKRD35Q8N283 1001 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 ZNF526Q8TF50 670 aaPredicted RBP15.6■□□□□ 0.09
ACTN1-205ENST00000538545 FIZ1Q96SL8 496 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 TTYH3Q9C0H2 523 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 TXNRD2Q9NNW7 524 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 HOXC10Q9NYD6 342 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 ADGRG1Q9Y653 693 aa15.6■□□□□ 0.09
ACTN1-205ENST00000538545 FAM170AA1A519 330 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 TPM1P09493 284 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 BCRP11274 1271 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 KNOP1Q1ED39 458 aaKnown RBP15.59■□□□□ 0.09
ACTN1-205ENST00000538545 ODR4Q5SWX8 454 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 PADI6Q6TGC4 694 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 NLRC4Q9NPP4 1024 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 PCDHB13Q9Y5F0 798 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 PPP1R2P41236 205 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 KCNMA1Q12791 1236 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 MAN2A1Q16706 1144 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 Q3C1V9 767 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 EPM2AIP1Q7L775 607 aaPredicted RBP15.59■□□□□ 0.09
ACTN1-205ENST00000538545 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
ACTN1-205ENST00000538545 BACH1O14867 736 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 TGFB1I1O43294 461 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 AKAP3O75969 853 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 PGK2P07205 417 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 MAPK7Q13164 816 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 SEPT14Q6ZU15 432 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 RDH13Q8NBN7 331 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 OPTNQ96CV9 577 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 KIFC3Q9BVG8 833 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 PARVGQ9HBI0 331 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 SIK3Q9Y2K2 1263 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 FRMPD4Q14CM0 1322 aa15.58■□□□□ 0.09
ACTN1-205ENST00000538545 A0A1W2PQC6 194 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 P4HBP07237 508 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 GJA5P36382 358 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 IREB2P48200 963 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 RARRES1P49788 294 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 ENOX2Q16206 610 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 SH3D19Q5HYK7 790 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 WDR78Q5VTH9 848 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 FAM178BQ8IXR5 827 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 PRIMPOLQ96LW4 560 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 ASCC2Q9H1I8 757 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 TCEAL9Q9UHQ7 104 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 WDR81Q562E7 1941 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 ZMYM2Q9UBW7 1377 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 TFRCP02786 760 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 TPM2P07951 284 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 YWHABP31946 246 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 QARSP47897 775 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 GNG11P61952 73 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 DCAF17Q5H9S7 520 aaPredicted RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 LBX2Q6XYB7 198 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 ZSWIM2Q8NEG5 633 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 OR8K1Q8NGG5 319 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 NSUN6Q8TEA1 469 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 ARID3AQ99856 593 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 ZSWIM4Q9H7M6 989 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 KCND1Q9NSA2 647 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 CAPN11Q9UMQ6 739 aa15.58■□□□□ 0.08
ACTN1-205ENST00000538545 REXO2Q9Y3B8 237 aaKnown RBP15.58■□□□□ 0.08
ACTN1-205ENST00000538545 ZNF862O60290 1169 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 ACTN1P12814 892 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 CCND2P30279 289 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 IRX3P78415 501 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-205ENST00000538545 CYP27A1Q02318 531 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 TCERG1LQ5VWI1 586 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 MCM3APO60318 1980 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 KCNJ6P48051 423 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 ETF1P62495 437 aaKnown RBP15.57■□□□□ 0.08
ACTN1-205ENST00000538545 NLRX1Q86UT6 975 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 KIF18AQ8NI77 898 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 ERGIC2Q96RQ1 377 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
ACTN1-205ENST00000538545 GABBR1Q9UBS5 961 aa15.57■□□□□ 0.08
ACTN1-205ENST00000538545 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.57■□□□□ 0.08
ACTN1-205ENST00000538545 CCDC175P0C221 793 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 CYP2C8P10632 490 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 KCNA2P16389 499 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 CYP2J2P51589 502 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 SWSAP1Q6NVH7 229 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 CYFIP1Q7L576 1253 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 ANKRD13AQ8IZ07 590 aa15.56■□□□□ 0.08
ACTN1-205ENST00000538545 RBM46Q8TBY0 533 aaKnown RBP15.56■□□□□ 0.08
ACTN1-205ENST00000538545 INPP4AQ96PE3 977 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms