RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 TBC1D12O60347 775 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 NOL4O94818 638 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 EYA4O95677 639 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 ATP1A1P05023 1023 aaKnown RBP10.2□□□□□ -0.78
DDB1-211ENST00000538280 PLEKP08567 350 aaPredicted RBP10.2□□□□□ -0.78
DDB1-211ENST00000538280 PRLRP16471 622 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 MUTP22033 750 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 KIF11P52732 1056 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 SNAP25P60880 206 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 MAP3K10Q02779 954 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 TERF2Q15554 542 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 NFIL3Q16649 462 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 SPDYE2Q495Y8 402 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 PRR16Q569H4 304 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 KIAA1755Q5JYT7 1200 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 BEND6Q5SZJ8 279 aaPredicted RBP10.2□□□□□ -0.78
DDB1-211ENST00000538280 HGSNATQ68CP4 663 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 NCAPH2Q6IBW4 605 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 DPY19L2P1Q6NXN4 242 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 WDR93Q6P2C0 686 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 AGBL3Q8NEM8 1001 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 NEK11Q8NG66 645 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 ZBED3Q96IU2 234 aaPredicted RBP10.2□□□□□ -0.78
DDB1-211ENST00000538280 CCDC42Q96M95 316 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 GANQ9H2C0 597 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 SH2D4AQ9H788 454 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 ARHGEF10LQ9HCE6 1279 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 ARFGAP3Q9NP61 516 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 EMILIN3Q9NT22 766 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 ZNF70Q9UC06 446 aaPredicted RBP10.2□□□□□ -0.78
DDB1-211ENST00000538280 ZBTB21Q9ULJ3 1066 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 TFR2Q9UP52 801 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 PCDHA13Q9Y5I0 950 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 SAR1BQ9Y6B6 198 aa10.2□□□□□ -0.78
DDB1-211ENST00000538280 ATP8B3O60423 1300 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 IPO7O95373 1038 aaKnown RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 TFRCP02786 760 aaKnown RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 SSBP05455 408 aaKnown RBP eCLIP10.19□□□□□ -0.78
DDB1-211ENST00000538280 HOXD13P35453 343 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 EIF4A3P38919 411 aaKnown RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 STAT2P52630 851 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 USP14P54578 494 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 PSMC6P62333 389 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 ITIH3Q06033 890 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 CKAP4Q07065 602 aaKnown RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 KIF5AQ12840 1032 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 PRKG1Q13976 671 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 SPA17Q15506 151 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 LONRF2Q1L5Z9 754 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 USH1GQ495M9 461 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 CCDC40Q4G0X9 1142 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 HERC4Q5GLZ8 1057 aaPredicted RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 B3GNT9Q6UX72 402 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 FRMD5Q7Z6J6 570 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 NOA1Q8NC60 698 aaKnown RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 SLC5A5Q92911 643 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 SECISBP2LQ93073 1101 aaKnown RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 REEP2Q9BRK0 252 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 WDR18Q9BV38 432 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 VCPKMTQ9H867 229 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 MMRN2Q9H8L6 949 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.19□□□□□ -0.78
DDB1-211ENST00000538280 TUFT1Q9NNX1 390 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 FAM207AQ9NSI2 230 aaPredicted RBP10.19□□□□□ -0.78
DDB1-211ENST00000538280 TMOD2Q9NZR1 351 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 DNM3Q9UQ16 869 aa10.19□□□□□ -0.78
DDB1-211ENST00000538280 GPR25O00155 361 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 WNT10BO00744 389 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 PDXKO00764 312 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 SLC16A3O15427 465 aaKnown RBP10.18□□□□□ -0.78
DDB1-211ENST00000538280 TLR2O60603 784 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 USO1O60763 962 aaKnown RBP10.18□□□□□ -0.78
DDB1-211ENST00000538280 PSMD10O75832 226 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 SERPING1P05155 500 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 TAL1P17542 331 aaPredicted RBP10.18□□□□□ -0.78
DDB1-211ENST00000538280 CASP5P51878 434 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 VSNL1P62760 191 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 CAP1Q01518 475 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 GHRHRQ02643 423 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 PPP2R5CQ13362 524 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 KNOP1Q1ED39 458 aaKnown RBP10.18□□□□□ -0.78
DDB1-211ENST00000538280 RRAGAQ7L523 313 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 FAM83AQ86UY5 434 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 FAM160B2Q86V87 743 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 SFR1Q86XK3 245 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 TRIM58Q8NG06 486 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 ACER1Q8TDN7 264 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 SMCR8Q8TEV9 937 aaPredicted RBP10.18□□□□□ -0.78
DDB1-211ENST00000538280 MMS19Q96T76 1030 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 HSD17B14Q9BPX1 270 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 EIF2AK1Q9BQI3 630 aaKnown RBP10.18□□□□□ -0.78
DDB1-211ENST00000538280 LSM14BQ9BX40 385 aaKnown RBP10.18□□□□□ -0.78
DDB1-211ENST00000538280 ZMYND15Q9H091 742 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 GBP3Q9H0R5 595 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 ZSWIM4Q9H7M6 989 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 GOPCQ9HD26 462 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 PLCB1Q9NQ66 1216 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 OLFML3Q9NRN5 406 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 HDAC9Q9UKV0 1011 aa10.18□□□□□ -0.78
DDB1-211ENST00000538280 L1RE1Q9UN81 338 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms