RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 LZTS2Q9BRK4 669 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 SUCLA2Q9P2R7 463 aaPredicted RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 RWDD2AQ9UIY3 292 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 INPP5FQ9Y2H2 1132 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ADCY9O60503 1353 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 HSPA4LO95757 839 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TRABDQ9H4I3 376 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 WDR47O94967 919 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TNNC2P02585 160 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PRAMEP78395 509 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 MYL7Q01449 175 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 GTF3C1Q12789 2109 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 KPNB1Q14974 876 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 HAUS3Q68CZ6 603 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PCDHB4Q9Y5E5 795 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 NQO1P15559 274 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 S100A5P33763 92 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 CDH24Q86UP0 819 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 DDX42Q86XP3 938 aaKnown RBP eCLIP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ARL8AQ96BM9 186 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 NMD3Q96D46 503 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 LCMT1Q9UIC8 334 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 UHRF1BP1Q6BDS2 1440 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ARHGEF11O15085 1522 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 LGALS16A8MUM7 142 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 VCPP55072 806 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PTGISQ16647 500 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ST13P5Q8NFI4 369 aaPredicted RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PYROXD1Q8WU10 500 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 MTA3Q9BTC8 594 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ARPP21Q9UBL0 812 aaPredicted RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TRPC6Q9Y210 931 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ARFIP2P53365 341 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 ATP1A4Q13733 1029 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 TMC5Q6UXY8 1006 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 LRRC31Q6UY01 552 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 CNBD2Q96M20 576 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 COPEO14579 308 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 HSPA9P38646 679 aaKnown RBP6.07□□□□□ -1.44
CSMD1-215ENST00000537824 DSG1Q02413 1049 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 HORMAD1Q86X24 394 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 LINS1Q8NG48 757 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PANK4Q9NVE7 773 aa6.07□□□□□ -1.44
CSMD1-215ENST00000537824 PRR23D1E9PI22 279 aaPredicted RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 LRRN2O75325 713 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PRR23D2P0DMB1 279 aaPredicted RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 CACNA2D1P54289 1103 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PRPSAP1Q14558 356 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 NONOQ15233 471 aaKnown RBP eCLIP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 C1orf112Q9NSG2 853 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 AQRO60306 1485 aaKnown RBP eCLIP6.06□□□□□ -1.443e-7■■■■■ 34.7
CSMD1-215ENST00000537824 NACAE9PAV3 2078 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 M0R3G1 203 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 DYNLT1P63172 113 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 MED21Q13503 144 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PDXDC1Q6P996 788 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 RFX6Q8HWS3 928 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 FBXL13Q8NEE6 735 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 DEPDC1BQ8WUY9 529 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PRPF18Q99633 342 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 ADNPQ9H2P0 1102 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 SNX25Q9H3E2 840 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PTGDRQ13258 359 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 CUL4AQ13619 759 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF654Q8IZM8 581 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 MAN2A1Q16706 1144 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 APOA5Q6Q788 366 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 NSUN7Q8NE18 718 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 RUBCNQ92622 972 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 XPO6Q96QU8 1125 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 LSG1Q9H089 658 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PJA2O43164 708 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 KDSRQ06136 332 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 MORF4L2Q15014 288 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 EFTUD2Q15029 972 aaKnown RBP eCLIP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 TEDDM1Q5T9Z0 273 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 DHX40Q8IX18 779 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 DDHD1Q8NEL9 900 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 OPTNQ96CV9 577 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF274Q96GC6 653 aaPredicted RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 ZBTB18Q99592 522 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 TRIM33Q9UPN9 1127 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 KRT1P04264 644 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 SNRPA1P09661 255 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 ATP2B4P23634 1241 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 KIF19Q2TAC6 998 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 COPG1Q9Y678 874 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PRDM1O75626 825 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 CHN1P15882 459 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 TNNI1P19237 187 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 CCDC80Q76M96 950 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 LZICQ8WZA0 190 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 APPBP2Q92624 585 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 HSPD1P10809 573 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 SLC39A14Q15043 492 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 COPS6Q7L5N1 327 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 KDM5CP41229 1560 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 LINC00854A0A1B0GVQ3 168 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 ATP1A1P05023 1023 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms