RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.25■□□□□ 0.67
SNX17-210ENST00000537606 CETN3O15182 167 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 BCRP11274 1271 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 PLS1Q14651 629 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 MEA1Q16626 185 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 CNKSR2Q8WXI2 1034 aa19.25■□□□□ 0.67
SNX17-210ENST00000537606 NHEJ1Q9H9Q4 299 aaPredicted RBP19.25■□□□□ 0.67
SNX17-210ENST00000537606 TMEM150BA6NC51 233 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 DSG3P32926 999 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 GHRHRQ02643 423 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 TMEM132BQ14DG7 1078 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 RRAGAQ7L523 313 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 TRIM59Q8IWR1 403 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 ZNF446Q9NWS9 450 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 RBBP6Q7Z6E9 1792 aaKnown RBP19.24■□□□□ 0.67
SNX17-210ENST00000537606 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
SNX17-210ENST00000537606 COG2Q14746 738 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 FIGNQ5HY92 759 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 REPS2Q8NFH8 660 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 PARVGQ9HBI0 331 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 NLRC4Q9NPP4 1024 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 ZNF214Q9UL59 606 aaPredicted RBP19.24■□□□□ 0.67
SNX17-210ENST00000537606 GUCA1BQ9UMX6 200 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 TRAF3IP3Q9Y228 551 aa19.24■□□□□ 0.67
SNX17-210ENST00000537606 ARHGEF35A5YM69 484 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 CASP4P49662 377 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 HERVK_113P62684 666 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 CYP27A1Q02318 531 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 EDRF1Q3B7T1 1238 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 TEX35Q5T0J7 233 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 ASTN1O14525 1302 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 A0A1W2PQJ5 194 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 EFCAB8A8MWE9 144 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 C19orf81C9J6K1 198 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 ADM5C9JUS6 153 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 H2AFXP16104 143 aaPredicted RBP19.23■□□□□ 0.67
SNX17-210ENST00000537606 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 NEK11Q8NG66 645 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 SPON1Q9HCB6 807 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 TMOD4Q9NZQ9 345 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 AFG3L2Q9Y4W6 797 aa19.23■□□□□ 0.67
SNX17-210ENST00000537606 LRRC53A6NM62 1247 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 AKAP3O75969 853 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 GNA14O95837 355 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 CLCN6P51797 869 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 CATSPERGQ6ZRH7 1159 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.22■□□□□ 0.679e-8■■□□□ 11.5
SNX17-210ENST00000537606 PRDM10Q9NQV6 1147 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 OLFML3Q9NRN5 406 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 RNF181Q9P0P0 153 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 PUF60Q9UHX1 559 aaKnown RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 FRMPD4Q14CM0 1322 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 COL11A1P12107 1806 aaPredicted RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 PDXKO00764 312 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 CALUO43852 315 aaPredicted RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 P4HBP07237 508 aaKnown RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 GAP43P17677 238 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 KCNH2Q12809 1159 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 VGLL4Q14135 290 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 UGCGQ16739 394 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 ODR4Q5SWX8 454 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 NIPA1Q7RTP0 329 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 CACNA2D4Q7Z3S7 1137 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 ZC3H3Q8IXZ2 948 aaKnown RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 KCTD17Q8N5Z5 321 aa19.22■□□□□ 0.67
SNX17-210ENST00000537606 LSM14BQ9BX40 385 aaKnown RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 MAP3K20Q9NYL2 800 aaKnown RBP19.22■□□□□ 0.67
SNX17-210ENST00000537606 TGFB1I1O43294 461 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 SORBS3O60504 671 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 HIP1RO75146 1068 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 NR3C1P04150 777 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 UTP14CQ5TAP6 766 aaKnown RBP19.21■□□□□ 0.67
SNX17-210ENST00000537606 PADI6Q6TGC4 694 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 FAM178BQ8IXR5 827 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 C12orf42Q96LP6 360 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 FIZ1Q96SL8 496 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 TYW1Q9NV66 732 aaKnown RBP19.21■□□□□ 0.67
SNX17-210ENST00000537606 ARHGAP20Q9P2F6 1191 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
SNX17-210ENST00000537606 PLAGL2Q9UPG8 496 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 PCDHB13Q9Y5F0 798 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 RCCD1A6NED2 376 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 FDX1P10109 184 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 MARSP56192 900 aaKnown RBP19.21■□□□□ 0.67
SNX17-210ENST00000537606 BAP1Q92560 729 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 RLFQ13129 1914 aa19.21■□□□□ 0.67
SNX17-210ENST00000537606 CTAGE9A4FU28 777 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 NOL4O94818 638 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 CCNE2O96020 404 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 NR3C2P08235 984 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 BMT2Q1RMZ1 405 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 DCAF17Q5H9S7 520 aaPredicted RBP19.2■□□□□ 0.66
SNX17-210ENST00000537606 ZNF720Q7Z2F6 126 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 DAW1Q8N136 415 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 ARMCX3Q9UH62 379 aaPredicted RBP19.2■□□□□ 0.66
SNX17-210ENST00000537606 ADAMTS5Q9UNA0 930 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 PARP14Q460N5 1801 aa19.2■□□□□ 0.66
SNX17-210ENST00000537606 MUTP22033 750 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 551 ms