RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 TCTN1Q2MV58 587 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 Q7L0L9 218 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 FBXO18Q8NFZ0 1043 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 ATP8B4Q8TF62 1192 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 OSBPL7Q9BZF2 842 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.54■□□□□ 0.72
GPN3-202ENST00000537466 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.54■□□□□ 0.72
GPN3-202ENST00000537466 ZBBXA8MT70 800 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 PARNO95453 639 aaKnown RBP19.54■□□□□ 0.72
GPN3-202ENST00000537466 UGCGQ16739 394 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 GPR153Q6NV75 609 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 TRMT1LQ7Z2T5 733 aaKnown RBP19.54■□□□□ 0.72
GPN3-202ENST00000537466 HAS1Q92839 578 aa19.54■□□□□ 0.72
GPN3-202ENST00000537466 NAP1L4Q99733 375 aaKnown RBP19.54■□□□□ 0.72
GPN3-202ENST00000537466 HBP1O60381 514 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 CAND2O75155 1236 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 SFNP31947 248 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 MCM2P49736 904 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 JAK3P52333 1124 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 SAFBQ15424 915 aaKnown RBP eCLIP19.53■□□□□ 0.72
GPN3-202ENST00000537466 TAF2Q6P1X5 1199 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 MIER3Q7Z3K6 550 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 CKAP2LQ8IYA6 745 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 DNAJB3Q8WWF6 145 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 TNPO1Q92973 898 aaKnown RBP19.53■□□□□ 0.72
GPN3-202ENST00000537466 MTIF3Q9H2K0 278 aaKnown RBP19.53■□□□□ 0.72
GPN3-202ENST00000537466 VAV3Q9UKW4 847 aa19.53■□□□□ 0.72
GPN3-202ENST00000537466 ZBTB42B2RXF5 422 aa19.52■□□□□ 0.72
GPN3-202ENST00000537466 ZNF862O60290 1169 aa19.52■□□□□ 0.72
GPN3-202ENST00000537466 ACTN1P12814 892 aa19.52■□□□□ 0.72
GPN3-202ENST00000537466 MTHFD1LQ6UB35 978 aa19.52■□□□□ 0.72
GPN3-202ENST00000537466 RPAINQ86UA6 219 aa19.52■□□□□ 0.72
GPN3-202ENST00000537466 BBXQ8WY36 941 aaPredicted RBP19.52■□□□□ 0.72
GPN3-202ENST00000537466 FAM20AQ96MK3 541 aa19.52■□□□□ 0.72
GPN3-202ENST00000537466 EML1O00423 815 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 TBX3O15119 743 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 CHRNA1P02708 482 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 PBX2P40425 430 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 FAM26DQ5JW98 314 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 CNKSR3Q6P9H4 555 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 RDM1Q8NG50 284 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 FAM49AQ9H0Q0 323 aaPredicted RBP19.51■□□□□ 0.71
GPN3-202ENST00000537466 PCDHA2Q9Y5H9 948 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 SLC4A7Q9Y6M7 1214 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 COL1A2P08123 1366 aa19.51■□□□□ 0.71
GPN3-202ENST00000537466 KIF28PB7ZC32 967 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 KLRC1P26715 233 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 PRKCEQ02156 737 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 MGAT3Q09327 533 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 PPP2R5CQ13362 524 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 ZNF484Q5JVG2 852 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 DEFB123Q8N688 67 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 PBX4Q9BYU1 374 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 FOXP1Q9H334 677 aaPredicted RBP19.5■□□□□ 0.71
GPN3-202ENST00000537466 ARID2Q68CP9 1835 aa19.5■□□□□ 0.71
GPN3-202ENST00000537466 OATP04181 439 aa19.49■□□□□ 0.71
GPN3-202ENST00000537466 ATP2B1P20020 1258 aa19.49■□□□□ 0.71
GPN3-202ENST00000537466 GJB2P29033 226 aa19.49■□□□□ 0.71
GPN3-202ENST00000537466 DBF4BQ8NFT6 615 aa19.49■□□□□ 0.71
GPN3-202ENST00000537466 MARCH6O60337 910 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 BAIAP3O94812 1187 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 DNAJB2P25686 324 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 RABGGTBP53611 331 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 TMEM62Q0P6H9 643 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 PLEKHG4Q58EX7 1191 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 RSPH3Q86UC2 560 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 BANK1Q8NDB2 785 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 FAM167AQ96KS9 214 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 FAM161BQ96MY7 647 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 CDY2AQ9Y6F7 541 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 SMIM35A0A1B0GVV1 85 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 NEMFO60524 1076 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 C22orf31O95567 290 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 ATP2A2P16615 1042 aaKnown RBP19.48■□□□□ 0.71
GPN3-202ENST00000537466 WDR5P61964 334 aaKnown RBP19.48■□□□□ 0.71
GPN3-202ENST00000537466 MRPS6P82932 125 aaKnown RBP19.48■□□□□ 0.71
GPN3-202ENST00000537466 SPIRE1Q08AE8 756 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 CALCRLQ16602 461 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 NOSTRINQ8IVI9 506 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 SLFN12Q8IYM2 578 aa19.48■□□□□ 0.71
GPN3-202ENST00000537466 TTYH1Q9H313 450 aaPredicted RBP19.48■□□□□ 0.71
GPN3-202ENST00000537466 TMEM150BA6NC51 233 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 STBD1O95210 358 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 BAG4O95429 457 aaKnown RBP19.47■□□□□ 0.71
GPN3-202ENST00000537466 MCM7P33993 719 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 DEFB103AP81534 67 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 GNL2Q13823 731 aaKnown RBP19.47■□□□□ 0.71
GPN3-202ENST00000537466 ZNF697Q5TEC3 545 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 NCAPH2Q6IBW4 605 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 MTMR9Q96QG7 549 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 TMEM60Q9H2L4 133 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 NRBP2Q9NSY0 501 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 MTMR10Q9NXD2 777 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 YBX2Q9Y2T7 364 aaKnown RBP19.47■□□□□ 0.71
GPN3-202ENST00000537466 CDH23Q9H251 3354 aa19.47■□□□□ 0.71
GPN3-202ENST00000537466 ABHD14A-ACY1A0A1B0GW23 586 aa19.46■□□□□ 0.71
GPN3-202ENST00000537466 GHRP10912 638 aa19.46■□□□□ 0.71
GPN3-202ENST00000537466 MYOGP15173 224 aa19.46■□□□□ 0.71
GPN3-202ENST00000537466 U2AF2P26368 475 aaKnown RBP eCLIP19.46■□□□□ 0.71
GPN3-202ENST00000537466 MKRN4PQ13434 485 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms