RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 XIRP2A4UGR9 3374 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 H3BNC9 293 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 MEIS1O00470 390 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 RB1P06400 928 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 ARP10275 920 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 CTNNB1P35222 781 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 SETQ01105 290 aaPredicted RBP11.18□□□□□ -0.62
CCDC170-202ENST00000537358 MGAT3Q09327 533 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 FUT2Q10981 343 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 LPIN1Q14693 890 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
CCDC170-202ENST00000537358 PUS10Q3MIT2 529 aaKnown RBP11.18□□□□□ -0.62
CCDC170-202ENST00000537358 FBXO47Q5MNV8 452 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 ODR4Q5SWX8 454 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 JAKMIP3Q5VZ66 844 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 MIS18BP1Q6P0N0 1132 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 FAM43BQ6ZT52 329 aaPredicted RBP11.18□□□□□ -0.62
CCDC170-202ENST00000537358 Q6ZUG5 572 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 PLA2G4DQ86XP0 818 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 REXO1Q8N1G1 1221 aaKnown RBP11.18□□□□□ -0.62
CCDC170-202ENST00000537358 NME8Q8N427 588 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 CYP2W1Q8TAV3 490 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 CCDC136Q96JN2 1154 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 NECAB3Q96P71 396 aaPredicted RBP11.18□□□□□ -0.62
CCDC170-202ENST00000537358 C11orf84Q9BUA3 381 aaPredicted RBP11.18□□□□□ -0.62
CCDC170-202ENST00000537358 FAM50BQ9Y247 325 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 PCDHA2Q9Y5H9 948 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 TRPV2Q9Y5S1 764 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 BRWD1Q9NSI6 2320 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 TTC3P53804 2025 aa11.18□□□□□ -0.62
CCDC170-202ENST00000537358 ADGRA3Q8IWK6 1321 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 MUC3AQ02505 3323 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 SMIM35A0A1B0GVV1 85 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 ESYT2A0FGR8 921 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
CCDC170-202ENST00000537358 IPO5O00410 1097 aaKnown RBP11.17□□□□□ -0.62
CCDC170-202ENST00000537358 NCK2O43639 380 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 HBP1O60381 514 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 STAG3L1P0CL83 205 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 KCNA5P22460 613 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 CDC27P30260 824 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 ADD1P35611 737 aaKnown RBP11.17□□□□□ -0.62
CCDC170-202ENST00000537358 APOBRQ0VD83 1088 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 PAK2Q13177 524 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 BTG3Q14201 252 aaPredicted RBP11.17□□□□□ -0.62
CCDC170-202ENST00000537358 PLCB4Q15147 1175 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 MARCH8Q5T0T0 291 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 EP400NLQ6ZTU2 488 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 CKAP2LQ8IYA6 745 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 CCDC148Q8NFR7 591 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 BRF1Q92994 677 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
CCDC170-202ENST00000537358 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 OSBPL7Q9BZF2 842 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 LMAN2LQ9H0V9 348 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 NSUN3Q9H649 340 aaKnown RBP11.17□□□□□ -0.62
CCDC170-202ENST00000537358 TBC1D22BQ9NU19 505 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 LRFN2Q9ULH4 789 aa11.17□□□□□ -0.62
CCDC170-202ENST00000537358 COL1A2P08123 1366 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 EVPLQ92817 2033 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ENPP3O14638 875 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ATG7O95352 703 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 CYP3A4P08684 503 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 COL9A1P20849 921 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 CD52P31358 61 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 BMPR1AP36894 532 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 CLK2P49760 499 aaKnown RBP11.16□□□□□ -0.62
CCDC170-202ENST00000537358 KRT76Q01546 638 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ITGB3BPQ13352 177 aaPredicted RBP11.16□□□□□ -0.62
CCDC170-202ENST00000537358 LEXMQ3ZCV2 418 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ZNF484Q5JVG2 852 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 MTHFD1LQ6UB35 978 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 SKAP1Q86WV1 359 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ATP8B4Q8TF62 1192 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 PPP2R3CQ969Q6 453 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 PCYT2Q99447 389 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ZNF577Q9BSK1 485 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 PLVAPQ9BX97 442 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 CELF4Q9BZC1 486 aaKnown RBP11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ZMYND12Q9H0C1 365 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 ZNF302Q9NR11 478 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 PCDHB13Q9Y5F0 798 aa11.16□□□□□ -0.62
CCDC170-202ENST00000537358 IGSF9BQ9UPX0 1349 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-202ENST00000537358 MAP3K13O43283 966 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 PRPF3O43395 683 aaKnown RBP11.15□□□□□ -0.62
CCDC170-202ENST00000537358 PSAPP07602 524 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 RPS6KB1P23443 525 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 KLRC1P26715 233 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 HSPA4P34932 840 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 TMEM62Q0P6H9 643 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 ZNF746Q6NUN9 644 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-202ENST00000537358 ABHD15Q6UXT9 468 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 NPAS4Q8IUM7 802 aa11.15□□□□□ -0.62
CCDC170-202ENST00000537358 SMAP1Q8IYB5 467 aaPredicted RBP11.15□□□□□ -0.62
CCDC170-202ENST00000537358 TRIM22Q8IYM9 498 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms