RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 LAMA3Q16787 3333 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 MCM3APO60318 1980 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 H0YGN5 161 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 ZNF213O14771 459 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 PGK2P07205 417 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 CCDC96Q2M329 555 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 ZNF792Q3KQV3 632 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 RCSD1Q6JBY9 416 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 OGFOD2Q6N063 350 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 KCTD1Q719H9 257 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 DTX1Q86Y01 620 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 CPXCR1Q8N123 301 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 ESR2Q92731 530 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 DPF3Q92784 378 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 TMEM47Q9BQJ4 181 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 RAVER2Q9HCJ3 691 aaKnown RBP8.26□□□□□ -1.09
YBX3-206ENST00000536823 FBXO40Q9UH90 709 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 NRBP1Q9UHY1 535 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 CTNNA3Q9UI47 895 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 DIS3Q9Y2L1 958 aaKnown RBP8.26□□□□□ -1.09
YBX3-206ENST00000536823 RIPK3Q9Y572 518 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 NR2E3Q9Y5X4 410 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 PFASO15067 1338 aa8.26□□□□□ -1.09
YBX3-206ENST00000536823 DNAJC25-GNG10A0A024R161 153 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 SEPT4O43236 478 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 COL6A1P12109 1028 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 CHMLP26374 656 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 CNGA1P29973 690 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 IMMTQ16891 758 aaKnown RBP8.25□□□□□ -1.09
YBX3-206ENST00000536823 TKFCQ3LXA3 575 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 PHLDB3Q6NSJ2 640 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 BTNL9Q6UXG8 535 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 AGGF1Q8N302 714 aaeCLIP8.25□□□□□ -1.09
YBX3-206ENST00000536823 CHST13Q8NET6 341 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 RUFY2Q8WXA3 655 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 CHMP4CQ96CF2 233 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 TTC14Q96N46 770 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 TINF2Q9BSI4 451 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
YBX3-206ENST00000536823 C11orf49Q9H6J7 331 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 MTMR7Q9Y216 660 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 ZNF536O15090 1300 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 SYNGAP1Q96PV0 1343 aa8.25□□□□□ -1.09
YBX3-206ENST00000536823 LAMA2P24043 3122 aaKnown RBP8.25□□□□□ -1.09
YBX3-206ENST00000536823 ZBTB42B2RXF5 422 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 B4E1Z4 1266 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 SGSM2O43147 1006 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 SNHG28P0DPA3 235 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 PDHBP11177 359 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 ZNF543Q08ER8 600 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 CCDC178Q5BJE1 867 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 SYDE2Q5VT97 1194 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
YBX3-206ENST00000536823 IQCA1Q86XH1 822 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 DGKHQ86XP1 1220 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 ALDH16A1Q8IZ83 802 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 MSL3Q8N5Y2 521 aaKnown RBP8.24□□□□□ -1.09
YBX3-206ENST00000536823 DDX11Q96FC9 970 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 FGD4Q96M96 766 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 ACAD9Q9H845 621 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 CNNM2Q9H8M5 875 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 HOMER2Q9NSB8 354 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 RNF146Q9NTX7 359 aa8.24□□□□□ -1.09
YBX3-206ENST00000536823 DNM1LO00429 736 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 DHX15O43143 795 aaKnown RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 MAP3K6O95382 1288 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 ZNF865P0CJ78 1059 aaPredicted RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 ALAS1P13196 640 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 SLC16A2P36021 539 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 SNAP25P60880 206 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 PTH1RQ03431 593 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 OCLNQ16625 522 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 HABP4Q5JVS0 413 aaKnown RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 PRAMEF19Q5SWL8 479 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 GPATCH4Q5T3I0 446 aaKnown RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 CCDC174Q6PII3 467 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 MAMDC4Q6UXC1 1216 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 CENPQQ7L2Z9 268 aaPredicted RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 C7orf61Q8IZ16 206 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 ANKRD35Q8N283 1001 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 ENAHQ8N8S7 591 aaPredicted RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 ANKS1AQ92625 1134 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 ZKSCAN3Q9BRR0 538 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 KRT23Q9C075 422 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 RANBP17Q9H2T7 1088 aaKnown RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 A1CFQ9NQ94 594 aaKnown RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 CCPG1Q9ULG6 757 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 GNEQ9Y223 722 aaKnown RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 CNPY2Q9Y2B0 182 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 TNKSO95271 1327 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 FRMPD2Q68DX3 1309 aaPredicted RBP8.23□□□□□ -1.09
YBX3-206ENST00000536823 LRRC37A2A6NM11 1700 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 LCTP09848 1927 aa8.23□□□□□ -1.09
YBX3-206ENST00000536823 KBTBD13C9JR72 458 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 SNAI1O95863 264 aaPredicted RBP8.22□□□□□ -1.09
YBX3-206ENST00000536823 ICAM1P05362 532 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 C8AP07357 584 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 RARBP10826 455 aa8.22□□□□□ -1.09
YBX3-206ENST00000536823 AKR1A1P14550 325 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms