RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CCDC148Q8NFR7 591 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 SEPT1Q8WYJ6 367 aa14.17□□□□□ -0.14
PRKDC-207ENST00000536483 IGLV3-22A0A075B6J6 115 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 GSTTP1A0A1W2PQM5 241 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 PFKFB2O60825 505 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 ATG7O95352 703 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 DEXIO95424 95 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 MARK3P27448 753 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
PRKDC-207ENST00000536483 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 GALNT17Q6IS24 598 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 TAF2Q6P1X5 1199 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 CPLX2Q6PUV4 134 aaKnown RBP14.16□□□□□ -0.14
PRKDC-207ENST00000536483 RPAINQ86UA6 219 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 TRIM22Q8IYM9 498 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 REXO1Q8N1G1 1221 aaKnown RBP14.16□□□□□ -0.14
PRKDC-207ENST00000536483 FIBCD1Q8N539 461 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 PABPC5Q96DU9 382 aaKnown RBP14.16□□□□□ -0.14
PRKDC-207ENST00000536483 SLC26A6Q9BXS9 759 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 NSUN3Q9H649 340 aaKnown RBP14.16□□□□□ -0.14
PRKDC-207ENST00000536483 TMEM260Q9NX78 707 aa14.16□□□□□ -0.14
PRKDC-207ENST00000536483 M0R2N6 131 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 ADAMTS3O15072 1205 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 EDIL3O43854 480 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 SEC24BO95487 1268 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 ARP10275 920 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 CTNNB1P35222 781 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 MGAT3Q09327 533 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 LPIN1Q14693 890 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 PUS10Q3MIT2 529 aaKnown RBP14.15□□□□□ -0.14
PRKDC-207ENST00000536483 DAGLBQ8NCG7 672 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 DNAJB3Q8WWF6 145 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 AGO4Q9HCK5 861 aaKnown RBP14.15□□□□□ -0.14
PRKDC-207ENST00000536483 PKD2L1Q9P0L9 805 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 TPCN1Q9ULQ1 816 aa14.15□□□□□ -0.14
PRKDC-207ENST00000536483 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.14
PRKDC-207ENST00000536483 STK36Q9NRP7 1315 aa14.15□□□□□ -0.15
PRKDC-207ENST00000536483 COL4A6Q14031 1691 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 KAT6AQ92794 2004 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 IGKV6D-21A0A0A0MT36 114 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 FAM86B1E9PN63 330 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 ENPP3O14638 875 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 CPLX1O14810 134 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 DHX15O43143 795 aaKnown RBP14.14□□□□□ -0.15
PRKDC-207ENST00000536483 CDKL5O76039 1030 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 FAM86B2P0C5J1 330 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 LINC00271P0C7V0 271 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 HOXD11P31277 338 aaPredicted RBP14.14□□□□□ -0.15
PRKDC-207ENST00000536483 USP11P51784 963 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 SCRN1Q12765 414 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 ITGB3BPQ13352 177 aaPredicted RBP14.14□□□□□ -0.15
PRKDC-207ENST00000536483 NPY5RQ15761 445 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 GRIK4Q16099 956 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 MARCH8Q5T0T0 291 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 JAKMIP3Q5VZ66 844 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 PLPPR4Q7Z2D5 763 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 RSPH3Q86UC2 560 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 GLG1Q92896 1179 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 ZBTB10Q96DT7 871 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 PGBD1Q96JS3 809 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 C22orf23Q9BZE7 217 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 JPH1Q9HDC5 661 aaPredicted RBP14.14□□□□□ -0.15
PRKDC-207ENST00000536483 CLDND1Q9NY35 253 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 ERAP1Q9NZ08 941 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 SLC9A2Q9UBY0 812 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 TUBE1Q9UJT0 475 aa14.14□□□□□ -0.15
PRKDC-207ENST00000536483 MBLAC1A4D2B0 266 aaPredicted RBP14.13□□□□□ -0.15
PRKDC-207ENST00000536483 C5orf67F2Z3F1 127 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 GRM6O15303 877 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 RB1P06400 928 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 BMPR1AP36894 532 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 AK2P54819 239 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 IGBP1P78318 339 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 COL19A1Q14993 1142 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 FBXO47Q5MNV8 452 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 PCYT2Q99447 389 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 SLKQ9H2G2 1235 aaPredicted RBP14.13□□□□□ -0.15
PRKDC-207ENST00000536483 SMARCAD1Q9H4L7 1026 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 VPS54Q9P1Q0 977 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 PCDHA4Q9UN74 947 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 CDY2AQ9Y6F7 541 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 ADGRA3Q8IWK6 1321 aa14.13□□□□□ -0.15
PRKDC-207ENST00000536483 NLRC5Q86WI3 1866 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 CYP3A7-CYP3A51PA0A087WV96 503 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 PRR33A8MZF0 331 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 CSPG5O95196 566 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 ALADP13716 330 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 CYP3A7P24462 503 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 LTBRP36941 435 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 SLC26A2P50443 739 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 SETQ01105 290 aaPredicted RBP14.12□□□□□ -0.15
PRKDC-207ENST00000536483 BTG3Q14201 252 aaPredicted RBP14.12□□□□□ -0.15
PRKDC-207ENST00000536483 C8orf34Q49A92 452 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 ABHD15Q6UXT9 468 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 TSHZ1Q6ZSZ6 1077 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 LENG9Q96B70 501 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 ZNF689Q96CS4 500 aaPredicted RBP14.12□□□□□ -0.15
PRKDC-207ENST00000536483 SDF4Q9BRK5 362 aa14.12□□□□□ -0.15
PRKDC-207ENST00000536483 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms