RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TEX2Q8IWB9 1127 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 DBNDD1Q9H9R9 158 aa17.58■□□□□ 0.4
CHMP1A-202ENST00000535997 SLC16A3O15427 465 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 SHOX2O60902 331 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 AKAP3O75969 853 aa17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 FTCDO95954 541 aa17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 NDUFB10O96000 172 aa17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 EPB41P11171 864 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 PRKCIP41743 596 aa17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 MRPS25P82663 173 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 USH1GQ495M9 461 aa17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 VAV3Q9UKW4 847 aa17.57■□□□□ 0.4
CHMP1A-202ENST00000535997 PIK3CDO00329 1044 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 EYA4O95677 639 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 GLI1P08151 1106 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 BMP3P12645 472 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 ACTN1P12814 892 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 IKQ13123 557 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 ENOX2Q16206 610 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 ZNF571Q7Z3V5 609 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 PACSIN1Q9BY11 444 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 BHMT2Q9H2M3 363 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 OLFML3Q9NRN5 406 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 SERPINA10Q9UK55 444 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 PCDHAC2Q9Y5I4 1007 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 PPFIA4O75335 1185 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 NR3C1P04150 777 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 MYBP10242 640 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 SNAP25P60880 206 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 DACT2Q5SW24 774 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 GBP6Q6ZN66 633 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 SRLQ86TD4 932 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 INPP4AQ96PE3 977 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 NAGPAQ9UK23 515 aa17.56■□□□□ 0.4
CHMP1A-202ENST00000535997 GTPBP10A4D1E9 387 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 HSF2BPO75031 334 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 TBCAO75347 108 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 TRIM37O94972 964 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 GAP43P17677 238 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 ZNF76P36508 570 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 EPHA7Q15375 998 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 TRERF1Q96PN7 1200 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 EIF2AK1Q9BQI3 630 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 SYNPO2Q9UMS6 1093 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 RABGAP1Q9Y3P9 1069 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 FLOT1O75955 427 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 TRAF1Q13077 416 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 RPS6KA1Q15418 735 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 ALKBH5Q6P6C2 394 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 TAF4BQ92750 862 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 HSD17B14Q9BPX1 270 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 EPB41L5Q9HCM4 733 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 TMEM59LQ9UK28 342 aa17.55■□□□□ 0.4
CHMP1A-202ENST00000535997 ATP8B3O60423 1300 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 A6NNZ2 444 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 MYO1CO00159 1063 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 OPLAHO14841 1288 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 HEXIM1O94992 359 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 GDF11O95390 407 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 CYP4A11Q02928 519 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 PAK2Q13177 524 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 SLC15A2Q16348 729 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 TUBB8Q3ZCM7 444 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 RBM26Q5T8P6 1007 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 VPS36Q86VN1 386 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 USP38Q8NB14 1042 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 TSEN2Q8NCE0 465 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 CYP2W1Q8TAV3 490 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 SLC35C1Q96A29 364 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 PBKQ96KB5 322 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 RUFY1Q96T51 708 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 RUSC1Q9BVN2 902 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 RRP15Q9Y3B9 282 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 ASTN1O14525 1302 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 RSPH10B2B2RC85 870 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 GCNT3O95395 438 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 RSPH10BP0C881 870 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 CARSP49589 748 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 GUCY2DQ02846 1103 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 DCAF17Q5H9S7 520 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 RINT1Q6NUQ1 792 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 FOXR1Q6PIV2 292 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 IQCKQ8N0W5 287 aa17.54■□□□□ 0.4
CHMP1A-202ENST00000535997 EIF3DO15371 548 aaKnown RBP eCLIP17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 ENTPD3O75355 529 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 HOXA13P31271 388 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 JAM2P57087 298 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 TNNC1P63316 161 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 TCERG1LQ5VWI1 586 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 OTOP1Q7RTM1 612 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 MREGQ8N565 214 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 EIF1ADQ8N9N8 165 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 RBM46Q8TBY0 533 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 LMBR1Q8WVP7 490 aa17.53■□□□□ 0.4
CHMP1A-202ENST00000535997 KRT12Q99456 494 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms