RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 CCDC60Q8IWA6 550 aaPredicted RBP18.14■□□□□ 0.49
VAMP1-205ENST00000535927 CEP57L1Q8IYX8 460 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 FMR1NBQ8N0W7 255 aaPredicted RBP18.14■□□□□ 0.49
VAMP1-205ENST00000535927 ANKLE1Q8NAG6 615 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 ENGASEQ8NFI3 743 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 UIMC1Q96RL1 719 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 JPH2Q9BR39 696 aaPredicted RBP18.14■□□□□ 0.49
VAMP1-205ENST00000535927 C16orf70Q9BSU1 422 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 MTG1Q9BT17 334 aaPredicted RBP18.14■□□□□ 0.49
VAMP1-205ENST00000535927 UNC93B1Q9H1C4 597 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 TUT1Q9H6E5 874 aaKnown RBP18.14■□□□□ 0.49
VAMP1-205ENST00000535927 RGL1Q9NZL6 768 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 OGDHLQ9ULD0 1010 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 KIAA1024Q9UPX6 916 aa18.14■□□□□ 0.49
VAMP1-205ENST00000535927 A0A1B0GVL5 298 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 POTEFA5A3E0 1075 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 PP2D1A8MPX8 630 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 POLR2DO15514 142 aaKnown RBP18.13■□□□□ 0.49
VAMP1-205ENST00000535927 ZNF202O95125 648 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 F2P00734 622 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 CDC25AP30304 524 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 NDUFA8P51970 172 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 SP4Q02446 784 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 ZNF484Q5JVG2 852 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 TMEM63BQ5T3F8 832 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 GJC2Q5T442 439 aaPredicted RBP18.13■□□□□ 0.49
VAMP1-205ENST00000535927 CCSAPQ6IQ19 270 aaPredicted RBP18.13■□□□□ 0.49
VAMP1-205ENST00000535927 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 ATP8B4Q8TF62 1192 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 PCYT2Q99447 389 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 TIPINQ9BVW5 301 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 TMEM106CQ9BVX2 250 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 CRISPLD2Q9H0B8 497 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 BMP2KQ9NSY1 1161 aaPredicted RBP18.13■□□□□ 0.49
VAMP1-205ENST00000535927 DDX19AQ9NUU7 478 aaKnown RBP18.13■□□□□ 0.49
VAMP1-205ENST00000535927 KCNG1Q9UIX4 513 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 COL1A2P08123 1366 aa18.13■□□□□ 0.49
VAMP1-205ENST00000535927 KIAA0100Q14667 2235 aaKnown RBP18.13■□□□□ 0.49
VAMP1-205ENST00000535927 RRN3P2A6NIE6 340 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 DNM1LO00429 736 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 KINO60870 393 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 GADD45BO75293 160 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 SGPL1O95470 568 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 OATP04181 439 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 RPLP2P05387 115 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 YWHABP31946 246 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 PURAQ00577 322 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 CYP4A11Q02928 519 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 PTPN11Q06124 597 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 SNW1Q13573 536 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 CTTNQ14247 550 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 KARSQ15046 597 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 LRRC41Q15345 812 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 E2F4Q16254 413 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 SV2BQ7L1I2 683 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 SYT2Q8N9I0 419 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 LARP4BQ92615 738 aaKnown RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 SYAP1Q96A49 352 aaPredicted RBP18.12■□□□□ 0.49
VAMP1-205ENST00000535927 PNMA5Q96PV4 448 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 TNMDQ9H2S6 317 aa18.12■□□□□ 0.49
VAMP1-205ENST00000535927 POTEB3A0JP26 581 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 KBTBD13C9JR72 458 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 HAS3O00219 553 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 GAS2O43903 313 aaKnown RBP18.11■□□□□ 0.49
VAMP1-205ENST00000535927 PGK1P00558 417 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 GNAT1P11488 350 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 PLCG1P19174 1290 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 UTP14CQ5TAP6 766 aaKnown RBP18.11■□□□□ 0.49
VAMP1-205ENST00000535927 CNNM4Q6P4Q7 775 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 POTEBQ6S5H4 581 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 CKAP2LQ8IYA6 745 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 ZNF710Q8N1W2 664 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 RAD54LQ92698 747 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 GTPBP4Q9BZE4 634 aaKnown RBP18.11■□□□□ 0.49
VAMP1-205ENST00000535927 KBTBD4Q9NVX7 518 aa18.11■□□□□ 0.49
VAMP1-205ENST00000535927 NRCAMQ92823 1304 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 MAGEB2O15479 319 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 ZNF862O60290 1169 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 STBD1O95210 358 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 RFC5P40937 340 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 GJA8P48165 433 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 PRKCEQ02156 737 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 NFKBIBQ15653 356 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 KCNA10Q16322 511 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 KLHL40Q2TBA0 621 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 KRBA2Q6ZNG9 492 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 SESTD1Q86VW0 696 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 CNNM3Q8NE01 707 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 CCDC43Q96MW1 224 aaKnown RBP18.1■□□□□ 0.49
VAMP1-205ENST00000535927 DEFB118Q96PH6 123 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 PHF24Q9UPV7 400 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 SCN10AQ9Y5Y9 1956 aa18.1■□□□□ 0.49
VAMP1-205ENST00000535927 FRMPD3Q5JV73 1810 aa18.09■□□□□ 0.49
VAMP1-205ENST00000535927 DGAT1O75907 488 aa18.09■□□□□ 0.49
VAMP1-205ENST00000535927 ASGR1P07306 291 aa18.09■□□□□ 0.49
VAMP1-205ENST00000535927 MYL3P08590 195 aa18.09■□□□□ 0.49
VAMP1-205ENST00000535927 PLA2G4BP0C869 781 aa18.09■□□□□ 0.49
VAMP1-205ENST00000535927 PLCB4Q15147 1175 aa18.09■□□□□ 0.49
VAMP1-205ENST00000535927 MTFR1Q15390 333 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms