RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 LRCH2Q5VUJ6 765 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 HAUS3Q68CZ6 603 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 KANK3Q6NY19 840 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 RDM1Q8NG50 284 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 NEK9Q8TD19 979 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 SCFD2Q8WU76 684 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
UBE3B-205ENST00000535900 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 AGO4Q9HCK5 861 aaKnown RBP12.1□□□□□ -0.47
UBE3B-205ENST00000535900 LRWD1Q9UFC0 647 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 MSRAQ9UJ68 235 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 KCNH3Q9ULD8 1083 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 HPSEQ9Y251 543 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 GRIN2DO15399 1336 aa12.1□□□□□ -0.47
UBE3B-205ENST00000535900 UNC80Q8N2C7 3258 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 GRXCR1A8MXD5 290 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 KINO60870 393 aaKnown RBP12.09□□□□□ -0.47
UBE3B-205ENST00000535900 PSMD10O75832 226 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 FGBP02675 491 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 SUPT20HL2P0C7V6 817 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 TECP42680 631 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 SYKP43405 635 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 ZNF445P59923 1031 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 PURAQ00577 322 aaKnown RBP12.09□□□□□ -0.47
UBE3B-205ENST00000535900 KRT76Q01546 638 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 NEDD9Q14511 834 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 IL17AQ16552 155 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 KRT79Q5XKE5 535 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 C16orf59Q7L2K0 433 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 OTOP2Q7RTS6 562 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 ENGASEQ8NFI3 743 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 HERVK_113Q902F9 699 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 NT5C3AQ9H0P0 336 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 WNT8AQ9H1J5 351 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 CUEDC2Q9H467 287 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 MAGEF1Q9HAY2 307 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 TRMT13Q9NUP7 481 aaKnown RBP12.09□□□□□ -0.47
UBE3B-205ENST00000535900 HOOK1Q9UJC3 728 aaKnown RBP12.09□□□□□ -0.47
UBE3B-205ENST00000535900 KDM3AQ9Y4C1 1321 aa12.09□□□□□ -0.47
UBE3B-205ENST00000535900 KIAA1217Q5T5P2 1943 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 RBM47A0AV96 593 aaKnown RBP12.08□□□□□ -0.48
UBE3B-205ENST00000535900 ARP10275 920 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
UBE3B-205ENST00000535900 PFKFB1P16118 471 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 SFNP31947 248 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 JAK3P52333 1124 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 CHMP4BP1P59074 171 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 SPIRE1Q08AE8 756 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 TTLL4Q14679 1199 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 GSE1Q14687 1217 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-205ENST00000535900 B3GNT9Q6UX72 402 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-205ENST00000535900 FMR1NBQ8N0W7 255 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-205ENST00000535900 IQUBQ8NA54 791 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
UBE3B-205ENST00000535900 CALML4Q96GE6 196 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 SCLYQ96I15 445 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 NKX2-4Q9H2Z4 354 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 CXXC1Q9P0U4 656 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-205ENST00000535900 VAV3Q9UKW4 847 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 NOD1Q9Y239 953 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 MRVI1Q9Y6F6 885 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 EYSQ5T1H1 3165 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 SCN10AQ9Y5Y9 1956 aa12.08□□□□□ -0.48
UBE3B-205ENST00000535900 A0A1B0GVL5 298 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
UBE3B-205ENST00000535900 RGS20O76081 388 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 ZNF202O95125 648 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 PFKMP08237 780 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 CYP2C9P11712 490 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 NDUFA8P51970 172 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 GRIN1Q05586 938 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 SNW1Q13573 536 aaKnown RBP12.07□□□□□ -0.48
UBE3B-205ENST00000535900 EPHA7Q15375 998 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 HYIQ5T013 277 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 CAVIN1Q6NZI2 390 aaKnown RBP12.07□□□□□ -0.48
UBE3B-205ENST00000535900 CABP7Q86V35 215 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
UBE3B-205ENST00000535900 COPS5Q92905 334 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 POLR3CQ9BUI4 534 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-205ENST00000535900 PRDM12Q9H4Q4 367 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 TUFT1Q9NNX1 390 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 DACT1Q9NYF0 836 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 STK17AQ9UEE5 414 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 SLC4A7Q9Y6M7 1214 aa12.07□□□□□ -0.48
UBE3B-205ENST00000535900 WDR64B1ANS9 1081 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 KPNA6O60684 536 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 DKC1O60832 514 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBE3B-205ENST00000535900 MYL1P05976 194 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 SLFN14P0C7P3 912 aa12.06□□□□□ -0.48
UBE3B-205ENST00000535900 KCNA2P16389 499 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms