RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 NRCAMQ92823 1304 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 KIAA1217Q5T5P2 1943 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 HMMRO75330 724 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 SP9P0CG40 484 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-206ENST00000535290 HSD17B4P51659 736 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 ITIH3Q06033 890 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 PGM5Q15124 567 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 QRICH1Q2TAL8 776 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 RRP12Q5JTH9 1297 aaKnown RBP9.65□□□□□ -0.86
CLIP1-206ENST00000535290 FAM102BQ5T8I3 360 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 UTP14CQ5TAP6 766 aaKnown RBP9.65□□□□□ -0.86
CLIP1-206ENST00000535290 COLGALT1Q8NBJ5 622 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 CASP10Q92851 521 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 ZBTB10Q96DT7 871 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 TMX1Q9H3N1 280 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 ENTPD7Q9NQZ7 604 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 TCP11L1Q9NUJ3 509 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 TYW1Q9NV66 732 aaKnown RBP9.65□□□□□ -0.86
CLIP1-206ENST00000535290 ANAPC4Q9UJX5 808 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 FBXL21Q9UKT6 434 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 PADI3Q9ULW8 664 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 MRPL11Q9Y3B7 192 aaKnown RBP9.65□□□□□ -0.86
CLIP1-206ENST00000535290 HCFC2Q9Y5Z7 792 aa9.65□□□□□ -0.86
CLIP1-206ENST00000535290 MYH7BA7E2Y1 1941 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 TBKBP1A7MCY6 615 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 EOMESO95936 686 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 ADRB1P08588 477 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 HOXA13P31271 388 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 MTHFRP42898 656 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 MRPS6P82932 125 aaKnown RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 TDGQ13569 410 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 MARCH8Q5T0T0 291 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 RARS2Q5T160 578 aaKnown RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 GPATCH4Q5T3I0 446 aaKnown RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 METTL7BQ6UX53 244 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 STOX1Q6ZVD7 989 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 RSPH3Q86UC2 560 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 ADGRF4Q8IZF3 695 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 HS6ST3Q8IZP7 471 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 MRPS27Q92552 414 aaKnown RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 CHAMP1Q96JM3 812 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 FTHL17Q9BXU8 183 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 NGRNQ9NPE2 291 aaKnown RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 CYP26B1Q9NR63 512 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 DBR1Q9UK59 544 aaKnown RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 ZNF215Q9UL58 517 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-206ENST00000535290 LRFN2Q9ULH4 789 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 DUSP12Q9UNI6 340 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 LZTS1Q9Y250 596 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 USTQ9Y2C2 406 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 PLXNA4Q9HCM2 1894 aa9.64□□□□□ -0.87
CLIP1-206ENST00000535290 KIAA1671Q9BY89 1806 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 MBLAC1A4D2B0 266 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-206ENST00000535290 KRBA1A5PL33 1030 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 STK25O00506 426 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 NARSO43776 548 aaKnown RBP9.63□□□□□ -0.87
CLIP1-206ENST00000535290 PLCB3Q01970 1234 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 SP4Q02446 784 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 PPFIA1Q13136 1202 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 ATAT1Q5SQI0 421 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 ZMYM1Q5SVZ6 1142 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 VPS53Q5VIR6 699 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 ZC3H14Q6PJT7 736 aaKnown RBP9.63□□□□□ -0.87
CLIP1-206ENST00000535290 LRRCC1Q9C099 1032 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 FAM49AQ9H0Q0 323 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-206ENST00000535290 CWH43Q9H720 699 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 KCNK12Q9HB15 430 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 VAT1LQ9HCJ6 419 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 PUF60Q9UHX1 559 aaKnown RBP9.63□□□□□ -0.87
CLIP1-206ENST00000535290 TUBE1Q9UJT0 475 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 PCDHB7Q9Y5E2 793 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 CACNA1IQ9P0X4 2223 aa9.63□□□□□ -0.87
CLIP1-206ENST00000535290 MGEA5O60502 916 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 CLASP2O75122 1294 aaKnown RBP9.62□□□□□ -0.87
CLIP1-206ENST00000535290 DCNP07585 359 aaKnown RBP9.62□□□□□ -0.87
CLIP1-206ENST00000535290 SDHBP21912 280 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 CCND2P30279 289 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 PBX3P40426 434 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 SARSP49591 514 aaKnown RBP9.62□□□□□ -0.87
CLIP1-206ENST00000535290 GHRHRQ02643 423 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 TMEM62Q0P6H9 643 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 NEDD9Q14511 834 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 GRIK4Q16099 956 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 TMEM266Q2M3C6 531 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 SPECC1Q5M775 1068 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
CLIP1-206ENST00000535290 KIAA1841Q6NSI8 718 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 TMC7Q7Z402 723 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 MRPL43Q8N983 215 aaKnown RBP9.62□□□□□ -0.87
CLIP1-206ENST00000535290 TTC14Q96N46 770 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 JMJD4Q9H9V9 463 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 CDV3Q9UKY7 258 aaKnown RBP9.62□□□□□ -0.87
CLIP1-206ENST00000535290 SQORQ9Y6N5 450 aa9.62□□□□□ -0.87
CLIP1-206ENST00000535290 FRYLO94915 3013 aa9.61□□□□□ -0.87
CLIP1-206ENST00000535290 IGSF9BQ9UPX0 1349 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms