RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DHX9Q08211 1270 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 ATP6V0A4Q9HBG4 840 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 PALLDQ8WX93 1383 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 NLRP1Q9C000 1473 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 TNFAIP2Q03169 654 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 WHAMMQ8TF30 809 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 PIGBQ92521 554 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 PLEKHF1Q96S99 279 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 PCDHB6Q9Y5E3 794 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 LRRC63Q05C16 580 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 PAGE5Q96GU1 130 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 HOXC10Q9NYD6 342 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 DONSONQ9NYP3 566 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 TBK1Q9UHD2 729 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 MOSPD1Q9UJG1 213 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 INPP5FQ9Y2H2 1132 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 CXCR5P32302 372 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 YWHAHQ04917 246 aaPredicted RBP19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 TTC30AQ86WT1 665 aa19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 TOPORSQ9NS56 1045 aaPredicted RBP19.54■□□□□ 0.72
SFSWAP-203ENST00000535236 EXOC1LA0A1B0GW35 172 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 C11orf57Q6ZUT1 292 aaPredicted RBP19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 LIG3P49916 1009 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 PTPN21Q16825 1174 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 PCDHA13Q9Y5I0 950 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 CRKP46108 304 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 NT5C2P49902 561 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 PTPN12Q05209 780 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 MTMR1Q13613 665 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 FBXL13Q8NEE6 735 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 VPS39Q96JC1 886 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 MMTAG2Q9BU76 263 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 NDST4Q9H3R1 872 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 NGRNQ9NPE2 291 aaKnown RBP19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 SH3GLB2Q9NR46 395 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 LIFRP42702 1097 aa19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 RPAP1Q9BWH6 1393 aaPredicted RBP19.53■□□□□ 0.72
SFSWAP-203ENST00000535236 EFCAB6Q5THR3 1501 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 ZMYND10O75800 440 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 PAMP19021 973 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 ACRBPQ8NEB7 543 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 ENOX1Q8TC92 643 aaKnown RBP19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 ARL6IP4Q66PJ3 421 aaKnown RBP19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 CXorf38Q8TB03 319 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 MTRQ99707 1265 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 DRC3Q9H069 523 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 KRT82Q9NSB4 513 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 SAMSN1Q9NSI8 373 aaKnown RBP19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 ANKARQ7Z5J8 1434 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 FAM83BQ5T0W9 1011 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 PDIK1LQ8N165 341 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 EXT2Q93063 718 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 PHLPP2Q6ZVD8 1323 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 MYO3BQ8WXR4 1341 aa19.52■□□□□ 0.72
SFSWAP-203ENST00000535236 SLCO1A2P46721 670 aa19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 SNCBQ16143 134 aa19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 PDCD2Q16342 344 aaPredicted RBP19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 DGKHQ86XP1 1220 aa19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 SH3RF3Q8TEJ3 882 aaPredicted RBP19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 GINM1Q9NU53 330 aa19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 PCDHA6Q9UN73 950 aa19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 PCDHA8Q9Y5H6 950 aa19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 METP08581 1390 aa19.52■□□□□ 0.71
SFSWAP-203ENST00000535236 PHKA2P46019 1235 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 DR1Q01658 176 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 ART3Q13508 389 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 CENPUQ71F23 418 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 SPTLC3Q9NUV7 552 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 G3BP2Q9UN86 482 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 FAF1Q9UNN5 650 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 ERBB3P21860 1342 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 DENND3A2RUS2 1198 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 PLS3P13797 630 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 RWDD2BP57060 319 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 RMDN3Q96TC7 470 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 BRIP1Q9BX63 1249 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 NRBP1Q9UHY1 535 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 IQANK1A0A1B0GTG1 560 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 SFI1A8K8P3 1242 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 DPYSL4O14531 572 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 LUC7L3O95232 432 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 CCT5P48643 541 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 TSPY1Q01534 308 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 PYROXD1Q8WU10 500 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 FEM1BQ9UK73 627 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 DNAJC8O75937 253 aaPredicted RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 FASTKD5Q7L8L6 764 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 PDCD7Q8N8D1 485 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 CCDC138Q96M89 665 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 RCOR1Q9UKL0 485 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 ZHX2Q9Y6X8 837 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 KDM5DQ9BY66 1539 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 CLDN3O15551 220 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 TAC1P20366 129 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 CACNB3P54284 484 aa19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 TWF2Q6IBS0 349 aaKnown RBP19.51■□□□□ 0.71
SFSWAP-203ENST00000535236 NCF2P19878 526 aaPredicted RBP19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 MAPK6Q16659 721 aa19.5■□□□□ 0.71
SFSWAP-203ENST00000535236 HSP90AA5PQ58FG0 334 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms