RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 MIGA2Q7L4E1 593 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 MAATS1Q7Z4T9 603 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 CCDC50Q8IVM0 306 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.77□□□□□ -0.85
SORL1-213ENST00000534754 MTMR8Q96EF0 704 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 MS4A14Q96JA4 679 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 NDST4Q9H3R1 872 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 MMRN2Q9H8L6 949 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 POLD4Q9HCU8 107 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 SLC40A1Q9NP59 571 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 SALL4Q9UJQ4 1053 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 PCDHA4Q9UN74 947 aa9.77□□□□□ -0.85
SORL1-213ENST00000534754 LRRC53A6NM62 1247 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 TMCO5BA8MYB1 307 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 LAD1O00515 517 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 FGRP09769 529 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 NF2P35240 595 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 STK4Q13043 487 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 RRP1BQ14684 758 aaKnown RBP9.76□□□□□ -0.85
SORL1-213ENST00000534754 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 COBLL1Q53SF7 1204 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 CST9Q5W186 159 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 CNNM4Q6P4Q7 775 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 LRIG3Q6UXM1 1119 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 RRAGAQ7L523 313 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 ANKRD13CQ8N6S4 541 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 SMC1BQ8NDV3 1235 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 CASKIN2Q8WXE0 1202 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 CYFIP2Q96F07 1278 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 CCDC114Q96M63 670 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 TRIM9Q9C026 710 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 LUC7LQ9NQ29 371 aaKnown RBP9.76□□□□□ -0.85
SORL1-213ENST00000534754 SH3GLB2Q9NR46 395 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 ARPP21Q9UBL0 812 aaPredicted RBP9.76□□□□□ -0.85
SORL1-213ENST00000534754 PARP14Q460N5 1801 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 ABCB11O95342 1321 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 SSU72P8A0A1W2PR75 194 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 ZSCAN5CA6NGD5 496 aaPredicted RBP9.76□□□□□ -0.85
SORL1-213ENST00000534754 GCOM1H8Y6P7 765 aaPredicted RBP9.76□□□□□ -0.85
SORL1-213ENST00000534754 EPHB6O15197 1021 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 BUB1O43683 1085 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 MYZAPP0CAP1 466 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 PLCG1P19174 1290 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 ELF1P32519 619 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 KIF5BP33176 963 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 HSPA9P38646 679 aaKnown RBP9.76□□□□□ -0.85
SORL1-213ENST00000534754 PRPHP41219 470 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 PRKG1Q13976 671 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 MAN2A1Q16706 1144 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 AK8Q96MA6 479 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 KRT12Q99456 494 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 C7orf25Q9BPX7 421 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 EDEM3Q9BZQ6 932 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 TMEM60Q9H2L4 133 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 DHX36Q9H2U1 1008 aaKnown RBP9.76□□□□□ -0.85
SORL1-213ENST00000534754 CENPHQ9H3R5 247 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 ZNF408Q9H9D4 720 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 TMBIM4Q9HC24 238 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 PLCB1Q9NQ66 1216 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 PLAAQ9Y263 795 aa9.76□□□□□ -0.85
SORL1-213ENST00000534754 GMNCA6NCL1 334 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 CLGNO14967 610 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 FGFR1OPO95684 399 aaKnown RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 HPDP32754 393 aaPredicted RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 SLC1A4P43007 532 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 TNNC1P63316 161 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 AMPD3Q01432 767 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 MAP3K10Q02779 954 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 GFPT1Q06210 699 aaPredicted RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 SNCBQ16143 134 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 CDC37Q16543 378 aaPredicted RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 ASTE1Q2TB18 679 aaPredicted RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 WLSQ5T9L3 541 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 CABP7Q86V35 215 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 EIF1ADQ8N9N8 165 aaKnown RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 PPANQ9NQ55 473 aaKnown RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 PI4KBQ9UBF8 816 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 SERPINB13Q9UIV8 391 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 ODF2LQ9ULJ1 636 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 PHF20L1A8MW92 1017 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 RBAK-RBAKDNI3L0D1 243 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 FCER1AP12319 257 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 SHMT1P34896 483 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 JAG1P78504 1218 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 CENPPQ6IPU0 288 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 PDXDC1Q6P996 788 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 CACNA2D4Q7Z3S7 1137 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 PARP9Q8IXQ6 854 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 BANK1Q8NDB2 785 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 RASGRP4Q8TDF6 673 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 LRRC15Q8TF66 581 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 BAP1Q92560 729 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 SEMA6BQ9H3T3 888 aa9.75□□□□□ -0.85
SORL1-213ENST00000534754 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.75□□□□□ -0.85
SORL1-213ENST00000534754 PCNTO95613 3336 aa9.74□□□□□ -0.85
SORL1-213ENST00000534754 NKRFO15226 690 aaKnown RBP eCLIP9.74□□□□□ -0.85
SORL1-213ENST00000534754 ORC4O43929 436 aa9.74□□□□□ -0.85
SORL1-213ENST00000534754 USP2O75604 605 aaPredicted RBP9.74□□□□□ -0.85
SORL1-213ENST00000534754 PALMO75781 387 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms