RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 DTX3Q8N9I9 347 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 KYQ8NBH2 561 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 FNIP1Q8TF40 1166 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 ZSWIM3Q96MP5 696 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 PWWP2AQ96N64 755 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 TMEM209Q96SK2 561 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 KRTAP9-9Q9BYP9 154 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 KRTAP9-4Q9BYQ2 154 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 EMC7Q9NPA0 242 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 TOMM22Q9NS69 142 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 ARHGAP28Q9P2N2 729 aa8.96□□□□□ -0.98
CASP4-213ENST00000534356 ZEB2O60315 1214 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 CYP17A1P05093 508 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 C8AP07357 584 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 OCRLQ01968 901 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 RTP5Q14D33 572 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 SKIDA1Q1XH10 827 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 LHFPL2Q6ZUX7 228 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 DDX42Q86XP3 938 aaKnown RBP eCLIP8.95□□□□□ -0.98
CASP4-213ENST00000534356 ERCC4Q92889 916 aaPredicted RBP8.95□□□□□ -0.98
CASP4-213ENST00000534356 DLL4Q9NR61 685 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 UCKL1Q9NWZ5 548 aa8.95□□□□□ -0.98
CASP4-213ENST00000534356 MPIG6BO95866 241 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 PTGS1P23219 599 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 FNTBP49356 437 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 STAT4Q14765 748 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 ESRP1Q6NXG1 681 aaKnown RBP8.94□□□□□ -0.98
CASP4-213ENST00000534356 HIPK4Q8NE63 616 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 ATL2Q8NHH9 583 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 IGDCC4Q8TDY8 1250 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 FOXRED1Q96CU9 486 aaPredicted RBP8.94□□□□□ -0.98
CASP4-213ENST00000534356 C16orf92Q96LL3 132 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 SPATA6Q9NWH7 488 aaPredicted RBP8.94□□□□□ -0.98
CASP4-213ENST00000534356 ATP8A1Q9Y2Q0 1164 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 ASB1Q9Y576 335 aa8.94□□□□□ -0.98
CASP4-213ENST00000534356 PRAMEF22A3QJZ6 481 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 BTBD11A6QL63 1104 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 GOLGA6L22H0YM25 854 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 RFXAPO00287 272 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 BRINP1O60477 761 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 CPEP16870 476 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 GLRBP48167 497 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 SMAD3P84022 425 aaKnown RBP8.93□□□□□ -0.98
CASP4-213ENST00000534356 SMAD2Q15796 467 aaKnown RBP8.93□□□□□ -0.98
CASP4-213ENST00000534356 ATP13A4Q4VNC1 1196 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 ZNF385BQ569K4 471 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 PRAMEF18Q5VWM3 479 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 RTN4RL1Q86UN2 441 aaPredicted RBP8.93□□□□□ -0.98
CASP4-213ENST00000534356 C11orf74Q86VG3 221 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 PASD1Q8IV76 773 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 TTLL6Q8N841 843 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 ZCRB1Q8TBF4 217 aaKnown RBP8.93□□□□□ -0.98
CASP4-213ENST00000534356 DACT3Q96B18 629 aaPredicted RBP8.93□□□□□ -0.98
CASP4-213ENST00000534356 CLIC6Q96NY7 704 aa8.93□□□□□ -0.98
CASP4-213ENST00000534356 DCAF1Q9Y4B6 1507 aa8.92□□□□□ -0.98
CASP4-213ENST00000534356 DLX2Q07687 328 aaPredicted RBP8.92□□□□□ -0.98
CASP4-213ENST00000534356 VWA3BQ502W6 1294 aa8.92□□□□□ -0.98
CASP4-213ENST00000534356 CILP2Q8IUL8 1156 aa8.92□□□□□ -0.98
CASP4-213ENST00000534356 AMNQ9BXJ7 453 aa8.92□□□□□ -0.98
CASP4-213ENST00000534356 ZMAT4Q9H898 229 aa8.92□□□□□ -0.98
CASP4-213ENST00000534356 ARHGAP20Q9P2F6 1191 aa8.92□□□□□ -0.98
CASP4-213ENST00000534356 MCM8Q9UJA3 840 aa8.92□□□□□ -0.98
CASP4-213ENST00000534356 APOBEC2Q9Y235 224 aaKnown RBP8.92□□□□□ -0.98
CASP4-213ENST00000534356 IL18BPO95998 194 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 NCLP19338 710 aaKnown RBP8.91□□□□□ -0.98
CASP4-213ENST00000534356 EPHA7Q15375 998 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 SAPCD2Q86UD0 394 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 WDR66Q8TBY9 1149 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 ZNF526Q8TF50 670 aaPredicted RBP8.91□□□□□ -0.98
CASP4-213ENST00000534356 BRINP2Q9C0B6 783 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 MS4A5Q9H3V2 200 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 INCENPQ9NQS7 918 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 GALNT8Q9NY28 637 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 ZFP69BQ9UJL9 534 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 CROTQ9UKG9 612 aa8.91□□□□□ -0.98
CASP4-213ENST00000534356 GPR39O43194 453 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 CDKN1CP49918 316 aaPredicted RBP8.9□□□□□ -0.98
CASP4-213ENST00000534356 TMPRSS15P98073 1019 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 TERF2Q15554 542 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 DDB1Q16531 1140 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 PRR31Q5SQ13 230 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 BROXQ5VW32 411 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 LRSAM1Q6UWE0 723 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 STPG3Q8N7X2 389 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 RTF1Q92541 710 aaKnown RBP8.9□□□□□ -0.98
CASP4-213ENST00000534356 SLC5A5Q92911 643 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 SCYL1Q96KG9 808 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 TACO1Q9BSH4 297 aaKnown RBP8.9□□□□□ -0.98
CASP4-213ENST00000534356 IRF2BPLQ9H1B7 796 aa8.9□□□□□ -0.98
CASP4-213ENST00000534356 FFAR3O14843 346 aa8.89□□□□□ -0.99
CASP4-213ENST00000534356 CDK11BP21127 795 aaKnown RBP8.89□□□□□ -0.99
CASP4-213ENST00000534356 AFF3P51826 1226 aaKnown RBP8.89□□□□□ -0.99
CASP4-213ENST00000534356 LRRC32Q14392 662 aa8.89□□□□□ -0.99
CASP4-213ENST00000534356 ADGRG2Q8IZP9 1017 aa8.89□□□□□ -0.99
CASP4-213ENST00000534356 PRPF38AQ8NAV1 312 aaKnown RBP8.89□□□□□ -0.99
CASP4-213ENST00000534356 NOP58Q9Y2X3 529 aaKnown RBP8.89□□□□□ -0.99
CASP4-213ENST00000534356 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 LCHNA4D1U4 455 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 NUAK1O60285 661 aa8.88□□□□□ -0.99
CASP4-213ENST00000534356 IBSPP21815 317 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms