RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 PTRH1Q86Y79 214 aaKnown RBP5.76□□□□□ -1.49
ITGB1-219ENST00000534049 STPG3Q8N7X2 389 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 SEC61A2Q9H9S3 476 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 CBLCQ9ULV8 474 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 ZDHHC9Q9Y397 364 aa5.76□□□□□ -1.49
ITGB1-219ENST00000534049 TARBP1Q13395 1621 aaKnown RBP5.76□□□□□ -1.49
ITGB1-219ENST00000534049 NPEPPSL1A6NEC2 478 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 PRAMEF25A6NGN4 478 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 PLD2O14939 933 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 PTGS1P23219 599 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 POLD1P28340 1107 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 GLRBP48167 497 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 CHST13Q8NET6 341 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 NUDT10Q8NFP7 164 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 WDR48Q8TAF3 677 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 UBXN4Q92575 508 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 NUDT11Q96G61 164 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 MRFAP1L1Q96HT8 127 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 LOXL4Q96JB6 756 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 DNAJC2Q99543 621 aaKnown RBP5.75□□□□□ -1.49
ITGB1-219ENST00000534049 KATNBL1Q9H079 304 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 NCOA5Q9HCD5 579 aaKnown RBP5.75□□□□□ -1.49
ITGB1-219ENST00000534049 MSL2Q9HCI7 577 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 JADE2Q9NQC1 790 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 CDK11AQ9UQ88 783 aaPredicted RBP5.75□□□□□ -1.49
ITGB1-219ENST00000534049 PTCH2Q9Y6C5 1203 aa5.75□□□□□ -1.49
ITGB1-219ENST00000534049 POLA1P09884 1462 aaPredicted RBP5.75□□□□□ -1.49
ITGB1-219ENST00000534049 FAM90A27PA6NNH2 459 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 HIP1RO75146 1068 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 AOAHP28039 575 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 JAM2P57087 298 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 USP10Q14694 798 aaKnown RBP5.74□□□□□ -1.49
ITGB1-219ENST00000534049 ARHGAP44Q17R89 818 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 LCE5AQ5TCM9 118 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 CIR1Q86X95 450 aaPredicted RBP5.74□□□□□ -1.49
ITGB1-219ENST00000534049 DRC1Q96MC2 740 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 GPR20Q99678 358 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 C1QTNF3Q9BXJ4 246 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 CARD11Q9BXL7 1154 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 SMURF1Q9HCE7 757 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 INCENPQ9NQS7 918 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 KCNH7Q9NS40 1196 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 MYRFQ9Y2G1 1151 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 SLC4A7Q9Y6M7 1214 aa5.74□□□□□ -1.49
ITGB1-219ENST00000534049 B4GALT4O60513 344 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 C4BPAP04003 597 aaKnown RBP5.73□□□□□ -1.49
ITGB1-219ENST00000534049 NFKB2Q00653 900 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 FNDC3BQ53EP0 1204 aaKnown RBP5.73□□□□□ -1.49
ITGB1-219ENST00000534049 ZMAT1Q5H9K5 638 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 CPZQ66K79 652 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 BRAPQ7Z569 592 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 DDX53Q86TM3 631 aaKnown RBP5.73□□□□□ -1.49
ITGB1-219ENST00000534049 SYNPOQ8N3V7 929 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 SLC7A14Q8TBB6 771 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 SCYL1Q96KG9 808 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 CDK5RAP1Q96SZ6 601 aaKnown RBP5.73□□□□□ -1.49
ITGB1-219ENST00000534049 TACO1Q9BSH4 297 aaKnown RBP5.73□□□□□ -1.49
ITGB1-219ENST00000534049 BTBD2Q9BX70 525 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 SLC39A2Q9NP94 309 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 GALNT8Q9NY28 637 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 PPP4R1LQ9P1A2 415 aa5.73□□□□□ -1.49
ITGB1-219ENST00000534049 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-219ENST00000534049 TCRBV16S1A1N1A0A5B0 115 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 SLC12A8A0AV02 714 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 RASGRP1O95267 797 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 IL18BPO95998 194 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 CSF2RBP32927 897 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 ETV4P43268 484 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 ADAM17P78536 824 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 ZXDCQ2QGD7 858 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-219ENST00000534049 WDR72Q3MJ13 1102 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 NOSTRINQ8IVI9 506 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 CISD2Q8N5K1 135 aaKnown RBP5.72□□□□□ -1.49
ITGB1-219ENST00000534049 CALML6Q8TD86 181 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 DVL3Q92997 716 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-219ENST00000534049 SSBP3Q9BWW4 388 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-219ENST00000534049 SEMA4AQ9H3S1 761 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 ASB1Q9Y576 335 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 WDR97A6NE52 1622 aa5.72□□□□□ -1.49
ITGB1-219ENST00000534049 RIMBP3CA6NJZ7 1639 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 RIMBP3BA6NNM3 1639 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 RIMBP3Q9UFD9 1639 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 ARHGEF11O15085 1522 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 CUX1P39880 1505 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 C1QTNF3-AMACRE9PGA6 284 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 SDHAP31040 664 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 FLT3P36888 993 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 TOP3AQ13472 1001 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-219ENST00000534049 BMS1Q14692 1282 aaKnown RBP5.71□□□□□ -1.5
ITGB1-219ENST00000534049 STILQ15468 1287 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 PHF19Q5T6S3 580 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 OVCH1Q7RTY7 1134 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 NPM2Q86SE8 214 aaKnown RBP5.71□□□□□ -1.5
ITGB1-219ENST00000534049 LILRB2Q8N423 598 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 C2orf69Q8N8R5 385 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 E2F7Q96AV8 911 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 SCLYQ96I15 445 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 WNK4Q96J92 1243 aa5.71□□□□□ -1.5
ITGB1-219ENST00000534049 BOCQ9BWV1 1114 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms