RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 TSPY3P0CV98 308 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 TSPY8P0CW00 308 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 SCG2P13521 617 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 MGAT3Q09327 533 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 UBE3CQ15386 1083 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 CCDC184Q52MB2 194 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 CELF3Q5SZQ8 465 aaKnown RBP10.52□□□□□ -0.73
PACS1-213ENST00000533756 LAIR1Q6GTX8 287 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 TAF2Q6P1X5 1199 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 KCNV1Q6PIU1 500 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 FAM43BQ6ZT52 329 aaPredicted RBP10.52□□□□□ -0.73
PACS1-213ENST00000533756 TMC7Q7Z402 723 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 RSPH3Q86UC2 560 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 SLC44A3Q8N4M1 653 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 C12orf76Q8N812 135 aaPredicted RBP10.52□□□□□ -0.73
PACS1-213ENST00000533756 COLGALT1Q8NBJ5 622 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 SPATA33Q96N06 139 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 FAM126AQ9BYI3 521 aaPredicted RBP10.52□□□□□ -0.73
PACS1-213ENST00000533756 ARHGEF3Q9NR81 526 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 SEMA4GQ9NTN9 838 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 RAB23Q9ULC3 237 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 CIZ1Q9ULV3 898 aaPredicted RBP10.52□□□□□ -0.73
PACS1-213ENST00000533756 SQORQ9Y6N5 450 aa10.52□□□□□ -0.73
PACS1-213ENST00000533756 TM4SF5O14894 197 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 PRDM1O75626 825 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 LAG3P18627 525 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 MAGEA9P43362 315 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 GATMP50440 423 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 LIMK1P53667 647 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 STARD6P59095 220 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 KRT17Q04695 432 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 SMC1AQ14683 1233 aaKnown RBP10.51□□□□□ -0.73
PACS1-213ENST00000533756 SOWAHCQ53LP3 525 aaPredicted RBP10.51□□□□□ -0.73
PACS1-213ENST00000533756 DCLRE1AQ6PJP8 1040 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 PRR23CQ6ZRP0 262 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 GPR149Q86SP6 731 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 GPR152Q8TDT2 470 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 SHDQ96IW2 340 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.51□□□□□ -0.73
PACS1-213ENST00000533756 TYW1Q9NV66 732 aaKnown RBP10.51□□□□□ -0.73
PACS1-213ENST00000533756 WDR19Q8NEZ3 1342 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 CEP295Q9C0D2 2601 aa10.51□□□□□ -0.73
PACS1-213ENST00000533756 CACNA1IQ9P0X4 2223 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 C2orf71A6NGG8 1288 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 ATP8B2P98198 1209 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 SLFNL1Q499Z3 407 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 SYDE2Q5VT97 1194 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 CELF5Q8N6W0 485 aaKnown RBP10.5□□□□□ -0.73
PACS1-213ENST00000533756 DCAF4Q8WV16 495 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 TAAR1Q96RJ0 339 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 TMEM121BQ9BXQ6 578 aaPredicted RBP10.5□□□□□ -0.73
PACS1-213ENST00000533756 USP26Q9BXU7 913 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 OSBPL6Q9BZF3 934 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 AGO3Q9H9G7 860 aaKnown RBP10.5□□□□□ -0.73
PACS1-213ENST00000533756 NRCAMQ92823 1304 aa10.5□□□□□ -0.73
PACS1-213ENST00000533756 GSG1L2A8MUP6 293 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 GDF9O60383 454 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 GGPS1O95749 300 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 LGALS2P05162 132 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 TGFB3P10600 412 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 CD52P31358 61 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 PPM1AP35813 382 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 SLC16A2P36021 539 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 ARHGAP4P98171 946 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 TFAP4Q01664 338 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 BMS1Q14692 1282 aaKnown RBP10.49□□□□□ -0.73
PACS1-213ENST00000533756 PTPN14Q15678 1187 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 LETM2Q2VYF4 491 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 TTBK2Q6IQ55 1244 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 KANK3Q6NY19 840 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 PRR23BQ6ZRT6 265 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 AACSQ86V21 672 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 LMBR1Q8WVP7 490 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 RSAD2Q8WXG1 361 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 ARHGAP45Q92619 1136 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 RMDN3Q96TC7 470 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 DNAJC2Q99543 621 aaKnown RBP10.49□□□□□ -0.73
PACS1-213ENST00000533756 FOXQ1Q9C009 403 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 CWH43Q9H720 699 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 SLC2A4RGQ9NR83 387 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 STX8Q9UNK0 236 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 PCDHB7Q9Y5E2 793 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 NBEAQ8NFP9 2946 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 DENND4AQ7Z401 1863 aa10.49□□□□□ -0.73
PACS1-213ENST00000533756 KIAA1217Q5T5P2 1943 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 KANSL1LA0AUZ9 987 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 TBKBP1A7MCY6 615 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 LRRN2O75325 713 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 RPLP2P05387 115 aaKnown RBP10.48□□□□□ -0.73
PACS1-213ENST00000533756 SARSP49591 514 aaKnown RBP10.48□□□□□ -0.73
PACS1-213ENST00000533756 CCDC96Q2M329 555 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 TMC5Q6UXY8 1006 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 SYTL5Q8TDW5 730 aaPredicted RBP10.48□□□□□ -0.73
PACS1-213ENST00000533756 GLG1Q92896 1179 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 STRBPQ96SI9 672 aaKnown RBP10.48□□□□□ -0.73
PACS1-213ENST00000533756 PUS7LQ9H0K6 701 aaKnown RBP10.48□□□□□ -0.73
PACS1-213ENST00000533756 MLXIPQ9HAP2 919 aa10.48□□□□□ -0.73
PACS1-213ENST00000533756 RXFP3Q9NSD7 469 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms