RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 GJA10Q969M2 543 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 VTI1AQ96AJ9 217 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 P2RX7Q99572 595 aaKnown RBP13.13□□□□□ -0.31
ATM-222ENST00000533733 BHMT2Q9H2M3 363 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.13□□□□□ -0.31
ATM-222ENST00000533733 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 INTUQ9ULD6 942 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 CAPN6Q9Y6Q1 641 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 NPHP3-ACAD11A0A0J9YXS1 232 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 MOCS3O95396 460 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 BCRP11274 1271 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
ATM-222ENST00000533733 RAPGEF1Q13905 1077 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 EPHA7Q15375 998 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 CFAP221Q4G0U5 840 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 MSL1Q68DK7 614 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 RINT1Q6NUQ1 792 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 AGBL3Q8NEM8 1001 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 CAPZA3Q96KX2 299 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 GMLQ99445 158 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 RIT2Q99578 217 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 PARVGQ9HBI0 331 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 NLRC4Q9NPP4 1024 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 STK32BQ9NY57 414 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 ZNF70Q9UC06 446 aaPredicted RBP13.13□□□□□ -0.31
ATM-222ENST00000533733 PCDHGC5Q9Y5F6 944 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 DUSP10Q9Y6W6 482 aa13.13□□□□□ -0.31
ATM-222ENST00000533733 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 YDJCA8MPS7 323 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 FLOT1O75955 427 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 GCNT3O95395 438 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 NR3C1P04150 777 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 CCDC172P0C7W6 258 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 MAPTP10636 758 aaKnown RBP13.12□□□□□ -0.31
ATM-222ENST00000533733 RFX1P22670 979 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 PSMC2P35998 433 aaKnown RBP13.12□□□□□ -0.31
ATM-222ENST00000533733 ZNF131P52739 623 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 GHRHRQ02643 423 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 MAP3K10Q02779 954 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 GFPT1Q06210 699 aaPredicted RBP13.12□□□□□ -0.31
ATM-222ENST00000533733 TNIP1Q15025 636 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 HS2ST1Q7LGA3 356 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 TMEM174Q8WUU8 243 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 FGFBP2Q9BYJ0 223 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 ASTN1O14525 1302 aa13.12□□□□□ -0.31
ATM-222ENST00000533733 SMCHD1A6NHR9 2005 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 A0A0U1RQG5 324 aaPredicted RBP13.11□□□□□ -0.31
ATM-222ENST00000533733 POLR3GO15318 223 aaPredicted RBP13.11□□□□□ -0.31
ATM-222ENST00000533733 TLR2O60603 784 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 GAS7O60861 476 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 SRGAP2O75044 1071 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 CFBP00751 764 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 ASNSP08243 561 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 FERP16591 822 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 CHRNA5P30532 468 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
ATM-222ENST00000533733 PSMC6P62333 389 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 RASSF7Q02833 373 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
ATM-222ENST00000533733 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 CCNI2Q6ZMN8 369 aaPredicted RBP13.11□□□□□ -0.31
ATM-222ENST00000533733 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 GOLGA6L1Q8N7Z2 621 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 SPATA4Q8NEY3 305 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 COG1Q8WTW3 980 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
ATM-222ENST00000533733 TEKT3Q9BXF9 490 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 MLXIPQ9HAP2 919 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 PDE11AQ9HCR9 933 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 ST7Q9NRC1 585 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 TFR2Q9UP52 801 aa13.11□□□□□ -0.31
ATM-222ENST00000533733 A0A0A6YYK5 440 aaPredicted RBP13.1□□□□□ -0.31
ATM-222ENST00000533733 MEIS1O00470 390 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 SLITRK3O94933 977 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 UCHL3P15374 230 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 GUCY2CP25092 1073 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 HOXA13P31271 388 aaPredicted RBP13.1□□□□□ -0.31
ATM-222ENST00000533733 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
ATM-222ENST00000533733 NNTQ13423 1086 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 EMBQ6PCB8 327 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 SLC9A9Q8IVB4 645 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.1□□□□□ -0.31
ATM-222ENST00000533733 TBC1D5Q92609 795 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 PKNOX2Q96KN3 472 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 CNTNAP1P78357 1384 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
ATM-222ENST00000533733 PRPF6O94906 941 aaKnown RBP13.1□□□□□ -0.31
ATM-222ENST00000533733 FDX1P10109 184 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms