RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 ORC2Q13416 577 aaPredicted RBP11.12□□□□□ -0.63
NUP98-220ENST00000533346 EARS2Q5JPH6 523 aaKnown RBP11.12□□□□□ -0.63
NUP98-220ENST00000533346 LRCH2Q5VUJ6 765 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 SWSAP1Q6NVH7 229 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 CCDC83Q8IWF9 413 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 ZNF710Q8N1W2 664 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 FBXO18Q8NFZ0 1043 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 APBB2Q92870 758 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 FAM167AQ96KS9 214 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 COL25A1Q9BXS0 654 aaPredicted RBP11.12□□□□□ -0.63
NUP98-220ENST00000533346 FOXP1Q9H334 677 aaPredicted RBP11.12□□□□□ -0.63
NUP98-220ENST00000533346 DISC1Q9NRI5 854 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 MTMR10Q9NXD2 777 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 CXXC1Q9P0U4 656 aaPredicted RBP11.12□□□□□ -0.63
NUP98-220ENST00000533346 DDX25Q9UHL0 483 aaKnown RBP11.12□□□□□ -0.63
NUP98-220ENST00000533346 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 TUBE1Q9UJT0 475 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 CEP131Q9UPN4 1083 aa11.12□□□□□ -0.63
NUP98-220ENST00000533346 ZBTB42B2RXF5 422 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 BTBD18B2RXH4 712 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 GAS7O60861 476 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 THPOP40225 353 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 NR5A1Q13285 461 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 TRIM29Q14134 588 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 RAB30Q15771 203 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 MTHFD1LQ6UB35 978 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 PIK3AP1Q6ZUJ8 805 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 RSPH3Q86UC2 560 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 DIS3L2Q8IYB7 885 aaKnown RBP11.11□□□□□ -0.63
NUP98-220ENST00000533346 SLFN12Q8IYM2 578 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 USP38Q8NB14 1042 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 HAS1Q92839 578 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 NIFKQ9BYG3 293 aaKnown RBP11.11□□□□□ -0.63
NUP98-220ENST00000533346 UNC45AQ9H3U1 944 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 PCDHA11Q9Y5I1 949 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 SLC4A7Q9Y6M7 1214 aa11.11□□□□□ -0.63
NUP98-220ENST00000533346 DDX39AO00148 427 aaKnown RBP11.1□□□□□ -0.63
NUP98-220ENST00000533346 MAGEB2O15479 319 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 SLC37A4O43826 429 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 STBD1O95210 358 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 CHRNA1P02708 482 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.63
NUP98-220ENST00000533346 MARK3P27448 753 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 IKBKEQ14164 716 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 SAFBQ15424 915 aaKnown RBP eCLIP11.1□□□□□ -0.63
NUP98-220ENST00000533346 TARBP2Q15633 366 aaKnown RBP11.1□□□□□ -0.63
NUP98-220ENST00000533346 LETM2Q2VYF4 491 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 IER5Q5VY09 327 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 DEFB128Q7Z7B8 93 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 DEFB123Q8N688 67 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 TMX3Q96JJ7 454 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 C8orf76Q96K31 380 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 PBX4Q9BYU1 374 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 SEMA6BQ9H3T3 888 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 NRBP2Q9NSY0 501 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 GABBR1Q9UBS5 961 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 VAV3Q9UKW4 847 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 PPME1Q9Y570 386 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 COL4A6Q14031 1691 aa11.1□□□□□ -0.63
NUP98-220ENST00000533346 BACH1O14867 736 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 ZNF862O60290 1169 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 CCNT1O60563 726 aaKnown RBP11.09□□□□□ -0.63
NUP98-220ENST00000533346 DKC1O60832 514 aaKnown RBP eCLIP11.09□□□□□ -0.63
NUP98-220ENST00000533346 DNAJB2P25686 324 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 KLRC1P26715 233 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 TRAPPC10P48553 1259 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 SPIRE1Q08AE8 756 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 RUFY4Q6ZNE9 571 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 DBF4BQ8NFT6 615 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 MTMR9Q96QG7 549 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 CEP89Q96ST8 783 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.63
NUP98-220ENST00000533346 TTYH1Q9H313 450 aaPredicted RBP11.09□□□□□ -0.63
NUP98-220ENST00000533346 TRPC6Q9Y210 931 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 KIF3AQ9Y496 699 aa11.09□□□□□ -0.63
NUP98-220ENST00000533346 IGKV6-21A0A0C4DH24 114 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 CD2BP2O95400 341 aaKnown RBP11.08□□□□□ -0.64
NUP98-220ENST00000533346 BAG4O95429 457 aaKnown RBP11.08□□□□□ -0.64
NUP98-220ENST00000533346 C22orf31O95567 290 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 OATP04181 439 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 ATP2A2P16615 1042 aaKnown RBP11.08□□□□□ -0.64
NUP98-220ENST00000533346 WDR5P61964 334 aaKnown RBP11.08□□□□□ -0.64
NUP98-220ENST00000533346 PSMC5P62195 406 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 MRPS6P82932 125 aaKnown RBP11.08□□□□□ -0.64
NUP98-220ENST00000533346 CUL4AQ13619 759 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 EPHA7Q15375 998 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 TCTN1Q2MV58 587 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 XKR3Q5GH77 459 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 FBXO47Q5MNV8 452 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 MIER3Q7Z3K6 550 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 HERC6Q8IVU3 1022 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 C4orf19Q8IY42 314 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 KIAA0319LQ8IZA0 1049 aa11.08□□□□□ -0.64
NUP98-220ENST00000533346 FAM184AQ8NB25 1140 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms